The baffled microtiter plate: Increased oxygen transfer and improved online monitoring in small scale fermentations

Most experiments in screening and process development are performed in shaken bioreactors. Today, microtiter plates are the preferred vessels for small‐scale microbial cultivations in high throughput, even though they have never been optimized for this purpose. To interpret the experimental results correctly and to obtain a base for a meaningful scale‐up, sufficient oxygen supply to the culture liquid is crucial. For shaken bioreactors this problem can generally be addressed by the introduction of baffles. Therefore, the focus of this study is to investigate how baffling and the well geometry affect the maximum oxygen transfer capacity (OTRmax) in microtiter plates. On a 48‐well plate scale, 30 different cross‐section geometries of a well were studied. It could be shown that the introduction of baffles into the common circular cylinder of a microtiter plate well doubles the maximum oxygen transfer capacity, resulting in values above 100 mmol/L/h (kLa > 600 1/h). To also guarantee a high volume for microbial cultivation, it is important to maximize the filling volume, applicable during orbital shaking. Additionally, the liquid height at the well bottom was examined, which is a decisive parameter for online‐monitoring systems such as the BioLector. This technology performs fiber‐optical measurements through the well bottom, therefore requires a constant liquid height at all shaking frequencies. Ultimately, a six‐petal flower‐shaped well geometry was shown to be the optimal solution taking into account all aforementioned criteria. With its favorable culture conditions and the possibility for unrestricted online monitoring, this novel microtiter plate is an efficient tool to gain meaningful results for interpreting and scaling‐up experiments in clone screening and bioprocess development. Biotechnol. Bioeng. 2009;103: 1118–1128. © 2009 Wiley Periodicals, Inc.

[1]  K. Riet,et al.  Review of Measuring Methods and Results in Nonviscous Gas-Liquid Mass Transfer in Stirred Vessels , 1979 .

[2]  B. Witholt,et al.  Effectiveness of orbital shaking for the aeration of suspended bacterial cultures in square-deepwell microtiter plates. , 2001, Biochemical engineering journal.

[3]  Elmer L. Gaden,et al.  Improved shaken flask performance , 1962 .

[4]  J Büchs,et al.  Quasi-continuous combined scattered light and fluorescence measurements: a novel measurement technique for shaken microtiter plates. , 2005, Biotechnology and bioengineering.

[5]  J. Büchs,et al.  Characterization of gas-liquid mass transfer phenomena in microtiter plates. , 2003, Biotechnology and bioengineering.

[6]  V. Vinci,et al.  Improvement of microbial strains and fermentation processes , 2000, Applied Microbiology and Biotechnology.

[7]  W. Duetz,et al.  Microtiter plates as mini-bioreactors: miniaturization of fermentation methods. , 2007, Trends in microbiology.

[8]  Robert Hermann,et al.  Methods for Intense Aeration, Growth, Storage, and Replication of Bacterial Strains in Microtiter Plates , 2000, Applied and Environmental Microbiology.

[9]  K. Riet,et al.  Mass transfer in fermentation , 1983 .

[10]  Geert Versteeg,et al.  Gas-Liquid Mass Transfer Coefficient in Stirred Tank Reactors , 2008 .

[11]  H. J. Henzler,et al.  Suitability of the shaking flask for oxygen supply to microbiological cultures , 1991 .

[12]  J Büchs,et al.  Introduction to advantages and problems of shaken cultures. , 2001, Biochemical engineering journal.

[13]  Oxygen limitation is a pitfall during screening for industrial strains , 2006, Applied Microbiology and Biotechnology.

[14]  J. Tunac High-aeration capacity shake-flask system , 1989 .

[15]  E. G. Bailey,et al.  Effect of Oxygen-Supply Rates on Growth of Escherichia coli , 1965, Applied microbiology.

[16]  Frank Kensy,et al.  Oxygen transfer phenomena in 48-well microtiter plates: determination by optical monitoring of sulfite oxidation and verification by real-time measurement during microbial growth. , 2005, Biotechnology and bioengineering.

[17]  J Büchs,et al.  Optical method for the determination of the oxygen-transfer capacity of small bioreactors based on sulfite oxidation. , 2001, Biotechnology and bioengineering.

[18]  Wouter A. Duetz,et al.  Oxygen transfer by orbital shaking of square vessels and deepwell microtiter plates of various dimensions , 2004 .

[19]  E. Galindo,et al.  Interaction of cultural conditions and end-product distribution in Bacillus subtilis grown in shake flasks , 1989, Applied Microbiology and Biotechnology.

[20]  Stephan A. Freyer,et al.  Validating shaking flasks as representative screening systems , 2004 .

[21]  J Büchs,et al.  Out-of-phase operating conditions, a hitherto unknown phenomenon in shaking bioreactors. , 2001, Biochemical engineering journal.

[22]  Pedro Fernandes,et al.  Microlitre/millilitre shaken bioreactors in fermentative and biotransformation processes – a review , 2006 .

[23]  Jochen Büchs,et al.  Impact of out-of-phase conditions on screening results in shaking flask experiments , 2004 .

[24]  G. Rao,et al.  A study of oxygen transfer in shake flasks using a non‐invasive oxygen sensor , 2003, Biotechnology and bioengineering.

[25]  Jochen Büchs,et al.  High-throughput screening for ionic liquids dissolving (ligno-)cellulose. , 2009, Bioresource technology.