Functional magnetic resonance imaging (fMRI) “brain reading”: detecting and classifying distributed patterns of fMRI activity in human visual cortex

Traditional (univariate) analysis of functional MRI (fMRI) data relies exclusively on the information contained in the time course of individual voxels. Multivariate analyses can take advantage of the information contained in activity patterns across space, from multiple voxels. Such analyses have the potential to greatly expand the amount of information extracted from fMRI data sets. In the present study, multivariate statistical pattern recognition methods, including linear discriminant analysis and support vector machines, were used to classify patterns of fMRI activation evoked by the visual presentation of various categories of objects. Classifiers were trained using data from voxels in predefined regions of interest during a subset of trials for each subject individually. Classification of subsequently collected fMRI data was attempted according to the similarity of activation patterns to prior training examples. Classification was done using only small amounts of data (20 s worth) at a time, so such a technique could, in principle, be used to extract information about a subject's percept on a near real-time basis. Classifiers trained on data acquired during one session were equally accurate in classifying data collected within the same session and across sessions separated by more than a week, in the same subject. Although the highest classification accuracies were obtained using patterns of activity including lower visual areas as input, classification accuracies well above chance were achieved using regions of interest restricted to higher-order object-selective visual areas. In contrast to typical fMRI data analysis, in which hours of data across many subjects are averaged to reveal slight differences in activation, the use of pattern recognition methods allows a subtle 10-way discrimination to be performed on an essentially trial-by-trial basis within individuals, demonstrating that fMRI data contain far more information than is typically appreciated.

[1]  D. Hubel,et al.  Anatomical Demonstration of Columns in the Monkey Striate Cortex , 1969, Nature.

[2]  D Haussler,et al.  Knowledge-based analysis of microarray gene expression data by using support vector machines. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[3]  D. Heeger,et al.  Linear Systems Analysis of Functional Magnetic Resonance Imaging in Human V1 , 1996, The Journal of Neuroscience.

[4]  N. Kanwisher,et al.  How Distributed Is Visual Category Information in Human Occipito-Temporal Cortex? An fMRI Study , 2002, Neuron.

[5]  Gunnar Rätsch,et al.  An introduction to kernel-based learning algorithms , 2001, IEEE Trans. Neural Networks.

[6]  Talma Hendler,et al.  Eccentricity Bias as an Organizing Principle for Human High-Order Object Areas , 2002, Neuron.

[7]  S Makeig,et al.  Analysis of fMRI data by blind separation into independent spatial components , 1998, Human brain mapping.

[8]  Stephan Heckers,et al.  A Method for Assessing the Accuracy of Intersubject Registration of the Human Brain Using Anatomic Landmarks , 1999, NeuroImage.

[9]  D. Hubel,et al.  Receptive fields and functional architecture of monkey striate cortex , 1968, The Journal of physiology.

[10]  J. V. Haxby,et al.  Spatial Pattern Analysis of Functional Brain Images Using Partial Least Squares , 1996, NeuroImage.

[11]  Tomaso A. Poggio,et al.  A pattern classification approach to dynamical object detection , 1999, Proceedings of the Seventh IEEE International Conference on Computer Vision.

[12]  A. Dale,et al.  High‐resolution intersubject averaging and a coordinate system for the cortical surface , 1999, Human brain mapping.

[13]  G. F. Hughes,et al.  On the mean accuracy of statistical pattern recognizers , 1968, IEEE Trans. Inf. Theory.

[14]  Leslie G. Ungerleider,et al.  Distributed representation of objects in the human ventral visual pathway. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[15]  A. Ishai,et al.  Distributed and Overlapping Representations of Faces and Objects in Ventral Temporal Cortex , 2001, Science.

[16]  N. Kanwisher,et al.  The Fusiform Face Area: A Module in Human Extrastriate Cortex Specialized for Face Perception , 1997, The Journal of Neuroscience.

[17]  N. Kanwisher,et al.  The Human Body , 2001 .

[18]  Karl J. Friston,et al.  Revealing interactions among brain systems with nonlinear PCA , 1999, Human brain mapping.