Joint Hierarchical Bayesian Learning of Full-structure Noise for Brain Source Imaging

Many problems in human brain imaging involve hierarchical Bayesian (type-II maximum likelihood) regression models for observations with latent variables for source and noise, where parameters of priors for source and noise terms need to be estimated jointly from data. One example are biomagnetic inverse problems, where crucial factors influencing accuracy of brain source estimation are not only the noise level but also its correlation structure. Importantly, existing approaches have not addressed estimation of a full-structure noise covariance matrix. Using ideas from Riemannian geometry, we derive an efficient algorithm for updating both source and a full-structure noise covariance along the manifold of positive definite matrices. Our results demonstrate that the novel framework significantly improves upon state-of-the-art techniques in the real-world scenario with fully-structured noise covariance.

[1]  Hejia Zhang,et al.  Incorporating structured assumptions with probabilistic graphical models in fMRI data analysis , 2020, Neuropsychologia.

[2]  Danna Zhou,et al.  d. , 1840, Microbial pathogenesis.

[3]  Bhaskar D. Rao,et al.  Sparse Bayesian learning for basis selection , 2004, IEEE Transactions on Signal Processing.

[4]  Stefan Haufe,et al.  Improving EEG Source Localization Through Spatio-Temporal Sparse Bayesian Learning , 2018, 2018 26th European Signal Processing Conference (EUSIPCO).

[5]  M. Burger,et al.  Variational regularisation for inverse problems with imperfect forward operators and general noise models , 2020, Inverse problems.

[6]  Mohammad Rostami,et al.  Efficient Environmental Temperature Monitoring Using Compressed Sensing , 2016, 2016 Data Compression Conference (DCC).

[7]  Daniel P. Palomar,et al.  A Signal Processing Perspective of Financial Engineering , 2016, Found. Trends Signal Process..

[8]  Julia P. Owen,et al.  Robust Bayesian estimation of the location, orientation, and time course of multiple correlated neural sources using MEG , 2010, NeuroImage.

[9]  Giuseppe Caire,et al.  Massive MIMO Channel Subspace Estimation From Low-Dimensional Projections , 2015, IEEE Transactions on Signal Processing.

[10]  Prabhu Babu,et al.  Majorization-Minimization Algorithms in Signal Processing, Communications, and Machine Learning , 2017, IEEE Transactions on Signal Processing.

[11]  David P. Wipf,et al.  Iterative Reweighted 1 and 2 Methods for Finding Sparse Solutions , 2010, IEEE J. Sel. Top. Signal Process..

[12]  Alexandre Gramfort,et al.  Generalized Concomitant Multi-Task Lasso for Sparse Multimodal Regression , 2017, AISTATS.

[13]  Sandeep Kumar,et al.  A Unified Framework for Structured Graph Learning via Spectral Constraints , 2019, J. Mach. Learn. Res..

[14]  Bhaskar D. Rao,et al.  Joint Channel Estimation and Data Detection in MIMO-OFDM Systems: A Sparse Bayesian Learning Approach , 2015, IEEE Transactions on Signal Processing.

[15]  I. Holopainen Riemannian Geometry , 1927, Nature.

[16]  Mohamed Hebiri,et al.  Learning Heteroscedastic Models by Convex Programming under Group Sparsity , 2013, ICML.

[17]  Jonathan D. Cohen,et al.  Matrix-normal models for fMRI analysis , 2017, AISTATS.

[18]  Hendrik Bernd Petersen,et al.  Robust Instance-Optimal Recovery of Sparse Signals at Unknown Noise Levels , 2020, Information and Inference: A Journal of the IMA.

[19]  G. G. Stokes "J." , 1890, The New Yale Book of Quotations.

[20]  Hongzhe Li,et al.  High‐Dimensional Heteroscedastic Regression with an Application to eQTL Data Analysis , 2012, Biometrics.

[21]  Ali Hashemi,et al.  Thermal Source Localization Through Infinite-Dimensional Compressed Sensing , 2017, 1710.02016.

[22]  Wei Wu,et al.  Bayesian Machine Learning: EEG\/MEG signal processing measurements , 2016, IEEE Signal Processing Magazine.

[23]  Giuseppe Caire,et al.  Structured Channel Covariance Estimation from Limited Samples in Massive MIMO , 2019, ICC 2020 - 2020 IEEE International Conference on Communications (ICC).

[24]  Chang Cai,et al.  Robust estimation of noise for electromagnetic brain imaging with the champagne algorithm , 2021, NeuroImage.

[25]  J. Jost Riemannian geometry and geometric analysis , 1995 .

[26]  Bhaskar D. Rao,et al.  Sparse Signal Recovery With Temporally Correlated Source Vectors Using Sparse Bayesian Learning , 2011, IEEE Journal of Selected Topics in Signal Processing.

[27]  Bertrand Thirion,et al.  Group level MEG/EEG source imaging via optimal transport: minimum Wasserstein estimates , 2019, IPMI.

[28]  Adeel Razi,et al.  Bayesian fusion and multimodal DCM for EEG and fMRI , 2019, NeuroImage.

[29]  D. Lehmann,et al.  Low resolution electromagnetic tomography: a new method for localizing electrical activity in the brain. , 1994, International journal of psychophysiology : official journal of the International Organization of Psychophysiology.

[30]  Leonidas J. Guibas,et al.  The Earth Mover's Distance as a Metric for Image Retrieval , 2000, International Journal of Computer Vision.

[31]  George Eastman House,et al.  Sparse Bayesian Learning and the Relevance Vector Machine , 2001 .

[32]  Christoph F. Mecklenbräuker,et al.  Multisnapshot Sparse Bayesian Learning for DOA , 2016, IEEE Signal Processing Letters.

[33]  Jonathan W. Pillow,et al.  A Bayesian method for reducing bias in neural representational similarity analysis , 2016, bioRxiv.

[34]  A. Gramfort,et al.  Mixed-norm estimates for the M/EEG inverse problem using accelerated gradient methods , 2012, Physics in medicine and biology.

[35]  Andreas Ziehe,et al.  Combining sparsity and rotational invariance in EEG/MEG source reconstruction , 2008, NeuroImage.

[36]  Stefan Haufe,et al.  Unification of sparse Bayesian learning algorithms for electromagnetic brain imaging with the majorization minimization framework , 2020, NeuroImage.

[37]  Axel Flinth,et al.  Approximate Recovery of Initial Point-like and Instantaneous Sources from Coarsely Sampled Thermal Fields via Infinite-Dimensional Compressed Sensing , 2018, 2018 26th European Signal Processing Conference (EUSIPCO).

[38]  Bhaskar D. Rao,et al.  An Empirical Bayesian Strategy for Solving the Simultaneous Sparse Approximation Problem , 2007, IEEE Transactions on Signal Processing.

[39]  Ming Bo Cai,et al.  Representational structure or task structure? Bias in neural representational similarity analysis and a Bayesian method for reducing bias , 2019, PLoS Comput. Biol..