Classification of usual interstitial pneumonia in patients with interstitial lung disease: assessment of a machine learning approach using high-dimensional transcriptional data.
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Ed Y. Tom | D. Lynch | G. Raghu | G. Kennedy | T. Colby | D. Pankratz | S. Y. Kim | J. Myers | M. Selman | Yoonha Choi | K. Brown | K. Flaherty | M. Steele | Jing Huang | J. Diggans | M. Pagan | Nicole Sindy | Jessica Anderson | H. Farah | M. J. Bukstein | A. Pardo | P. Wolters | S. Nathan | A. Katzenstein | Jessica R. Anderson | Moraima Pagan | J. Myers
[1] R. Sussman,et al. A phase 3 trial of pirfenidone in patients with idiopathic pulmonary fibrosis. , 2014, The New England journal of medicine.
[2] Trevor Hastie,et al. Regularization Paths for Generalized Linear Models via Coordinate Descent. , 2010, Journal of statistical software.
[3] N. Milman,et al. HLA-G polymorphisms and HLA-G expression in sarcoidosis. , 2006, Sarcoidosis, vasculitis, and diffuse lung diseases : official journal of WASOG.
[4] M. Selman,et al. Hypersensitivity pneumonitis: insights in diagnosis and pathobiology. , 2012, American journal of respiratory and critical care medicine.
[5] Xavier Robin,et al. pROC: an open-source package for R and S+ to analyze and compare ROC curves , 2011, BMC Bioinformatics.
[6] Takeshi Johkoh,et al. American Thoracic Society Documents An Official ATS / ERS / JRS / ALAT Statement : Idiopathic Pulmonary Fibrosis : Evidence-based Guidelines for Diagnosis and Management , 2011 .
[7] David A. Lynch,et al. Idiopathic pulmonary fibrosis: Diagnosis and treatment: International Consensus Statement , 2000 .
[8] Moisés Selman,et al. Idiopathic pulmonary fibrosis , 2011, The Lancet.
[9] G. Raghu,et al. Ascertainment of individual risk of mortality for patients with idiopathic pulmonary fibrosis. , 2010, American journal of respiratory and critical care medicine.
[10] Naftali Kaminski,et al. A novel genomic signature with translational significance for human idiopathic pulmonary fibrosis. , 2015, American journal of respiratory cell and molecular biology.
[11] H. Collard,et al. Efficacy and safety of nintedanib in idiopathic pulmonary fibrosis. , 2014, The New England journal of medicine.
[12] M. Selman,et al. Idiopathic pulmonary fi brosis , 2011 .
[13] A. Katzenstein. Smoking-related interstitial fibrosis (SRIF), pathogenesis and treatment of usual interstitial pneumonia (UIP), and transbronchial biopsy in UIP , 2012, Modern Pathology.
[14] Susan Murray,et al. Idiopathic interstitial pneumonia: do community and academic physicians agree on diagnosis? , 2007, American journal of respiratory and critical care medicine.
[15] Sharon Sanderson,et al. Gene set analysis of lung samples provides insight into pathogenesis of progressive, fibrotic pulmonary sarcoidosis. , 2010, American journal of respiratory and critical care medicine.
[16] Gordon K. Smyth,et al. limma: Linear Models for Microarray Data , 2005 .
[17] D. Schroeder,et al. Incidence, prevalence, and clinical course of idiopathic pulmonary fibrosis: a population-based study. , 2010, Chest.
[18] M. Murphy,et al. The importance of early diagnosis and treatment , 1997 .
[19] O. Hilberg,et al. Idiopathic Pulmonary Fibrosis - Diagnosis and Treatment , 2014 .
[20] T. Pietras,et al. The selected genetic polymorphisms of metalloproteinases MMP2, 7, 9 and MMP inhibitor TIMP2 in sarcoidosis , 2011, Medical science monitor : international medical journal of experimental and clinical research.
[21] Byung-Hoon Lee,et al. Gene expression profiling in human lung fibroblast following cadmium exposure. , 2008, Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association.
[22] Naftali Kaminski,et al. Gene expression profiles distinguish idiopathic pulmonary fibrosis from hypersensitivity pneumonitis. , 2006, American journal of respiratory and critical care medicine.
[23] Frank Stahl,et al. Transcriptome analysis using next-generation sequencing. , 2013, Current opinion in biotechnology.
[24] A. Wells,et al. Managing diagnostic procedures in idiopathic pulmonary fibrosis , 2013, European Respiratory Review.
[25] Lior Pachter,et al. Sequence Analysis , 2020, Definitions.
[26] Luca Richeldi,et al. Neglected evidence in idiopathic pulmonary fibrosis and the importance of early diagnosis and treatment , 2014, European Respiratory Review.
[27] Susan Murray,et al. Idiopathic interstitial pneumonia: what is the effect of a multidisciplinary approach to diagnosis? , 2004, American journal of respiratory and critical care medicine.
[28] Rafael A Irizarry,et al. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. , 2003, Biostatistics.
[29] Paul Theodor Pyl,et al. HTSeq—a Python framework to work with high-throughput sequencing data , 2014, bioRxiv.
[30] Ivana V. Yang,et al. Expression of cilium-associated genes defines novel molecular subtypes of idiopathic pulmonary fibrosis , 2013, Thorax.
[31] T. Maher,et al. The treatment of idiopathic pulmonary fibrosis , 2014, F1000prime reports.
[32] Naftali Kaminski,et al. Up-Regulation and Profibrotic Role of Osteopontin in Human Idiopathic Pulmonary Fibrosis , 2005, PLoS medicine.
[33] Johan A. K. Suykens,et al. Least Squares Support Vector Machine Classifiers , 1999, Neural Processing Letters.
[34] Zora Modrusan,et al. Heterogeneous gene expression signatures correspond to distinct lung pathologies and biomarkers of disease severity in idiopathic pulmonary fibrosis , 2014, Thorax.
[35] Fatih Ozsolak,et al. RNA sequencing: advances, challenges and opportunities , 2011, Nature Reviews Genetics.
[36] R. Bois,et al. Strategies for treating idiopathic pulmonary fibrosis , 2010, Nature Reviews Drug Discovery.
[37] H. Collard,et al. Changes in clinical and physiologic variables predict survival in idiopathic pulmonary fibrosis. , 2003, American journal of respiratory and critical care medicine.
[38] A. Wells. The revised ATS/ERS/JRS/ALAT diagnostic criteria for idiopathic pulmonary fibrosis (IPF) - practical implications , 2013, Respiratory Research.
[39] David P. Naidich,et al. Fibrosing interstitial lung disease. A practical high-resolution computed tomography-based approach to diagnosis and management and a review of the literature. , 2013, American journal of respiratory and critical care medicine.
[40] Arnold Simanowitz,et al. international consensus statement , 2000 .
[41] N. Müller,et al. Computed tomography findings in pathological usual interstitial pneumonia: relationship to survival. , 2008, American journal of respiratory and critical care medicine.
[42] Low sputum MMP-9/TIMP ratio is associated with airway narrowing in smokers with asthma , 2014, European Respiratory Journal.
[43] M. Selman,et al. TISSUE INHIBITOR OF METALLOPROTEINASE-3 IS UP-REGULATED BY TRANSFORMING GROWTH FACTOR-β1 IN VITRO AND EXPRESSED IN FIBROBLASTIC FOCI IN VIVO IN IDIOPATHIC PULMONARY FIBROSIS , 2006, Experimental lung research.