Spectrin-level modeling of the cytoskeleton and optical tweezers stretching of the erythrocyte.

We present a three-dimensional computational study of whole-cell equilibrium shape and deformation of human red blood cell (RBC) using spectrin-level energetics. Random network models consisting of degree-2, 3, ..., 9 junction complexes and spectrin links are used to populate spherical and biconcave surfaces and intermediate shapes, and coarse-grained molecular dynamics simulations are then performed with spectrin connectivities fixed. A sphere is first filled with cytosol and gradually deflated while preserving its total surface area, until cytosol volume consistent with the real RBC is reached. The equilibrium shape is determined through energy minimization by assuming that the spectrin tetramer links satisfy the worm-like chain free-energy model. Subsequently, direct stretching by optical tweezers of the initial equilibrium shape is simulated to extract the variation of axial and transverse diameters with the stretch force. At persistence length p = 7.5 nm for the spectrin tetramer molecule and corresponding in-plane shear modulus mu(0) approximately 8.3 microN/m, our models show reasonable agreement with recent experimental measurements on the large deformation of RBC with optical tweezers. We find that the choice of the reference state used for the in-plane elastic energy is critical for determining the equilibrium shape. If a position-independent material reference state such as a full sphere is used in defining the in-plane energy, then the bending modulus kappa needs to be at least a decade larger than the widely accepted value of 2 x 10(-19) J to stabilize the biconcave shape against the cup shape. We demonstrate through detailed computations that this paradox can be avoided by invoking the physical hypothesis that the spectrin network undergoes constant remodeling to always relax the in-plane shear elastic energy to zero at any macroscopic shape, at some slow characteristic timescale. We have devised and implemented a liquefied network structure evolution algorithm that relaxes shear stress everywhere in the network and generates cytoskeleton structures that mimic experimental observations.

[1]  B. Forget,et al.  Erythroid and nonerythroid spectrins. , 1993, Blood.

[2]  R. Coppel,et al.  The malaria-infected red blood cell: Structural and functional changes , 2001, Advances in Parasitology.

[3]  D. Discher,et al.  Direct measures of large, anisotropic strains in deformation of the erythrocyte cytoskeleton. , 1999, Biophysical journal.

[4]  C. Brooks Computer simulation of liquids , 1989 .

[5]  M. Baumann,et al.  Local membrane curvature affects spontaneous membrane fluctuation characteristics , 2003, Molecular membrane biology.

[6]  C. Bustamante,et al.  Ten years of tension: single-molecule DNA mechanics , 2003, Nature.

[7]  Weber,et al.  Computer simulation of local order in condensed phases of silicon. , 1985, Physical review. B, Condensed matter.

[8]  H. Berendsen,et al.  Molecular dynamics with coupling to an external bath , 1984 .

[9]  Rao,et al.  Topology changes in fluid membranes. , 1992, Physical review. A, Atomic, molecular, and optical physics.

[10]  C. Lim,et al.  Mechanics of the human red blood cell deformed by optical tweezers , 2003 .

[11]  U. Seifert,et al.  Mapping vesicle shapes into the phase diagram: A comparison of experiment and theory , 1996, cond-mat/9612151.

[12]  A C BURTON,et al.  MECHANICAL PROPERTIES OF THE RED CELL MEMBRANE. I. MEMBRANE STIFFNESS AND INTRACELLULAR PRESSURE. , 1964, Biophysical journal.

[13]  Alfonso Mondragón,et al.  Structures of Two Repeats of Spectrin Suggest Models of Flexibility , 1999, Cell.

[14]  R. Mukhopadhyay,et al.  Stomatocyte–discocyte–echinocyte sequence of the human red blood cell: Evidence for the bilayer– couple hypothesis from membrane mechanics , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[15]  E. Elson,et al.  Cellular mechanics as an indicator of cytoskeletal structure and function. , 1988, Annual review of biophysics and biophysical chemistry.

[16]  S. Suresha,et al.  Mechanics of the human red blood cell deformed by optical tweezers , 2003 .

[17]  F. Stillinger Exponential multiplicity of inherent structures , 1999 .

[18]  Chwee Teck Lim,et al.  Connections between single-cell biomechanics and human disease states: gastrointestinal cancer and malaria. , 2005, Acta biomaterialia.

[19]  J. Simeon,et al.  Elasticity of the human red blood cell skeleton. , 2003, Biorheology.

[20]  Peter M. A. Sloot,et al.  Modelling and Simulation , 1988, Systems Analysis and Simulation 1988, I: Theory and Foundations. Proceedings of the International Symposium held in Berlin (GDR), September 12–16, 1988.

[21]  A. Kusumi,et al.  Structure of the erythrocyte membrane skeleton as observed by atomic force microscopy. , 1998, Biophysical journal.

[22]  E. Evans,et al.  Molecular maps of red cell deformation: hidden elasticity and in situ connectivity. , 1994, Science.

[23]  Seifert,et al.  Shape transformations of vesicles: Phase diagram for spontaneous- curvature and bilayer-coupling models. , 1991, Physical review. A, Atomic, molecular, and optical physics.

[24]  S. Hénon,et al.  A new determination of the shear modulus of the human erythrocyte membrane using optical tweezers. , 1999, Biophysical journal.

[25]  M. Peterson An instability of the red blood cell shape , 1985 .

[26]  S. Torquato,et al.  Random Heterogeneous Materials: Microstructure and Macroscopic Properties , 2005 .

[27]  Subra Suresh,et al.  Mechanics of the human red blood cell deformed by optical tweezers [Journal of the Mechanics and Physics of Solids, 51 (2003) 2259-2280] , 2005 .

[28]  R M Hochmuth,et al.  Measurement of the elastic modulus for red cell membrane using a fluid mechanical technique. , 1973, Biophysical journal.

[29]  S. Suresh,et al.  Nonlinear elastic and viscoelastic deformation of the human red blood cell with optical tweezers. , 2004, Mechanics & chemistry of biosystems : MCB.

[30]  D. Boal,et al.  Simulations of the erythrocyte cytoskeleton at large deformation. II. Micropipette aspiration. , 1998, Biophysical journal.

[31]  Eshel Ben-Jacob When order comes naturally , 2002, Nature.

[32]  E. Evans,et al.  New membrane concept applied to the analysis of fluid shear- and micropipette-deformed red blood cells. , 1973, Biophysical journal.

[33]  M. Rief,et al.  How strong is a covalent bond? , 1999, Science.

[34]  R. Mcgreevy,et al.  Reverse Monte Carlo modelling , 2001 .

[35]  E. Evans,et al.  Mechanical properties of the red cell membrane in relation to molecular structure and genetic defects. , 1994, Annual review of biophysics and biomolecular structure.

[36]  D. Boal,et al.  Simulations of the erythrocyte cytoskeleton at large deformation. I. Microscopic models. , 1998, Biophysical journal.

[37]  Seifert,et al.  Dual network model for red blood cell membranes. , 1992, Physical review letters.

[38]  R. Rand,et al.  MECHANICAL PROPERTIES OF THE RED CELL MEMBRANE. II. VISCOELASTIC BREAKDOWN OF THE MEMBRANE. , 1964, Biophysical journal.

[39]  Seifert,et al.  Budding transitions of fluid-bilayer vesicles: The effect of area-difference elasticity. , 1994, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics.

[40]  L. Derick,et al.  Visualization of the hexagonal lattice in the erythrocyte membrane skeleton , 1987, The Journal of cell biology.

[41]  S. Suresh,et al.  Cell and molecular mechanics of biological materials , 2003, Nature materials.

[42]  V. Marchesi,et al.  Stabilizing infrastructure of cell membranes. , 1985, Annual review of cell biology.

[43]  P. Canham The minimum energy of bending as a possible explanation of the biconcave shape of the human red blood cell. , 1970, Journal of theoretical biology.

[44]  S. Cowin,et al.  Biomechanics: Mechanical Properties of Living Tissues, 2nd ed. , 1994 .

[45]  S Chien,et al.  Influence of network topology on the elasticity of the red blood cell membrane skeleton. , 1997, Biophysical journal.

[46]  Agnes Ostafin,et al.  Sample preparation and imaging of erythrocyte cytoskeleton with the atomic force microscopy , 2007, Cell Biochemistry and Biophysics.

[47]  J. Behnke Evasion of immunity by nematode parasites causing chronic infections. , 1987, Advances in parasitology.

[48]  P. Agre,et al.  Alteration of the erythrocyte membrane skeletal ultrastructure in hereditary spherocytosis, hereditary elliptocytosis, and pyropoikilocytosis. , 1990, Blood.

[49]  R. Skalak,et al.  Strain energy function of red blood cell membranes. , 1973, Biophysical journal.

[50]  D. Discher,et al.  Deformation-enhanced fluctuations in the red cell skeleton with theoretical relations to elasticity, connectivity, and spectrin unfolding. , 2001, Biophysical journal.

[51]  D. Branton,et al.  Visualization of the protein associations in the erythrocyte membrane skeleton. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[52]  E. Evans,et al.  Dynamic strength of molecular adhesion bonds. , 1997, Biophysical journal.

[53]  R. Simmons,et al.  Elasticity of the red cell membrane and its relation to hemolytic disorders: an optical tweezers study. , 1999, Biophysical journal.

[54]  S. Torquato,et al.  Reconstructing random media , 1998 .

[55]  D A Weitz,et al.  Grain Boundary Scars and Spherical Crystallography , 2003, Science.

[56]  R C Macdonald,et al.  Atomic force microscopy of the erythrocyte membrane skeleton , 2001, Journal of microscopy.

[57]  S Chien,et al.  Elastic deformations of red blood cells. , 1977, Journal of biomechanics.

[58]  N. Gov,et al.  Red blood cell membrane fluctuations and shape controlled by ATP-induced cytoskeletal defects. , 2005, Biophysical journal.

[59]  Robert E. Rudd,et al.  COARSE-GRAINED MOLECULAR DYNAMICS AND THE ATOMIC LIMIT OF FINITE ELEMENTS , 1998 .

[60]  R. Mukhopadhyay,et al.  Echinocyte shapes: bending, stretching, and shear determine spicule shape and spacing. , 2001, Biophysical journal.

[61]  S. Lowen The Biophysical Journal , 1960, Nature.

[62]  D. Branton,et al.  The molecular basis of erythrocyte shape. , 1986, Science.

[63]  Dennis E. Discher,et al.  PHASE TRANSITIONS AND ANISOTROPIC RESPONSES OF PLANAR TRIANGULAR NETS UNDER LARGE DEFORMATION , 1997 .

[64]  W. Helfrich Elastic Properties of Lipid Bilayers: Theory and Possible Experiments , 1973, Zeitschrift fur Naturforschung. Teil C: Biochemie, Biophysik, Biologie, Virologie.