Large-scale characterization of intact N-glycopeptides using an automated glycoproteomic method.
暂无分享,去创建一个
Daniel Figeys | Mingliang Ye | Hanfa Zou | Rui Chen | Kai Cheng | D. Figeys | H. Zou | M. Ye | Rui Chen | Kai Cheng | Deeptee Seebun | Deeptee Seebun | Hanfa Zou
[1] J. Elder,et al. endo-beta-N-acetylglucosaminidase F: endoglycosidase from Flavobacterium meningosepticum that cleaves both high-mannose and complex glycoproteins. , 1982, Proceedings of the National Academy of Sciences of the United States of America.
[2] J. Dennis,et al. Reduced contact-inhibition and substratum adhesion in epithelial cells expressing GlcNAc-transferase V , 1995, The Journal of cell biology.
[3] M. Aebi,et al. N-linked protein glycosylation in the endoplasmic reticulum , 2000 .
[4] A. Krogh,et al. Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. , 2001, Journal of molecular biology.
[5] A. Dell,et al. Glycoprotein Structure Determination by Mass Spectrometry , 2001, Science.
[6] Michael J Deery,et al. Precursor ion scanning for detection and structural characterization of heterogeneous glycopeptide mixtures , 2002, Journal of the American Society for Mass Spectrometry.
[7] R. Spiro. Protein glycosylation: nature, distribution, enzymatic formation, and disease implications of glycopeptide bonds. , 2002, Glycobiology.
[8] E. Eklund,et al. Hyposialylation of Integrins Stimulates the Activity of Myeloid Fibronectin Receptors* , 2002, The Journal of Biological Chemistry.
[9] M. Mann,et al. Improved peptide identification in proteomics by two consecutive stages of mass spectrometric fragmentation. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[10] K. Sekiguchi,et al. Introduction of Bisecting GlcNAc into Integrin α5β1 Reduces Ligand Binding and Down-regulates Cell Adhesion and Cell Migration* , 2004, Journal of Biological Chemistry.
[11] M. Mann,et al. Parts per Million Mass Accuracy on an Orbitrap Mass Spectrometer via Lock Mass Injection into a C-trap*S , 2005, Molecular & Cellular Proteomics.
[12] A. Deelder,et al. Protein glycosylation analyzed by normal-phase nano-liquid chromatography--mass spectrometry of glycopeptides. , 2005, Analytical chemistry.
[13] O. Jensen. Interpreting the protein language using proteomics , 2006, Nature Reviews Molecular Cell Biology.
[14] J. Marth,et al. Glycosylation in Cellular Mechanisms of Health and Disease , 2006, Cell.
[15] David Goldberg,et al. Automated N-glycopeptide identification using a combination of single- and tandem-MS. , 2007, Journal of proteome research.
[16] Steven P Gygi,et al. Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry , 2007, Nature Methods.
[17] A. Deelder,et al. Electron transfer dissociation of N-glycopeptides: loss of the entire N-glycosylated asparagine side chain. , 2007, Rapid communications in mass spectrometry : RCM.
[18] E. Go,et al. Simplification of mass spectral analysis of acidic glycopeptides using GlycoPep ID. , 2007, Analytical chemistry.
[19] Sakari Joenväärä,et al. N-glycoproteomics - an automated workflow approach. , 2008, Glycobiology.
[20] László Drahos,et al. GlycoMiner: a new software tool to elucidate glycopeptide composition. , 2008, Rapid communications in mass spectrometry : RCM.
[21] W. Alley,et al. Characterization of glycopeptides by combining collision-induced dissociation and electron-transfer dissociation mass spectrometry data. , 2009, Rapid communications in mass spectrometry : RCM.
[22] Xinning Jiang,et al. Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry. , 2009, Journal of proteome research.
[23] C. Hesse,et al. Enrichment of glycopeptides for glycan structure and attachment site identification , 2009, Nature Methods.
[24] Xinmiao Liang,et al. Hydrophilic interaction chromatography based enrichment of glycopeptides by using click maltose: a matrix with high selectivity and glycosylation heterogeneity coverage. , 2009, Chemistry.
[25] R. Renkonen,et al. De novo glycan structure search with the CID MS/MS spectra of native N-glycopeptides. , 2009, Glycobiology.
[26] S. Nishimura,et al. Sialic Acid-focused Quantitative Mouse Serum Glycoproteomics by Multiple Reaction Monitoring Assay* , 2010, Molecular & Cellular Proteomics.
[27] Y. Mechref,et al. Characterizing protein glycosylation sites through higher-energy C-trap dissociation. , 2010, Rapid communications in mass spectrometry : RCM.
[28] Kai Cheng,et al. ArMone: a software suite specially designed for processing and analysis of phosphoproteome data. , 2010, Journal of proteome research.
[29] Martin Frank,et al. GlycomeDB—a unified database for carbohydrate structures , 2010, Nucleic Acids Res..
[30] P. Stanley. Golgi glycosylation. , 2011, Cold Spring Harbor Perspectives in Biology.
[31] D. Schaffer,et al. Extensive Determination of Glycan Heterogeneity Reveals an Unusual Abundance of High Mannose Glycans in Enriched Plasma Membranes of Human Embryonic Stem Cells* , 2011, Molecular & Cellular Proteomics.
[32] Haixu Tang,et al. Improving confidence in detection and characterization of protein N-glycosylation sites and microheterogeneity. , 2011, Rapid communications in mass spectrometry : RCM.
[33] Radoslav Goldman,et al. Semi-automated identification of N-Glycopeptides by hydrophilic interaction chromatography, nano-reverse-phase LC-MS/MS, and glycan database search. , 2012, Journal of proteome research.
[34] Helen J Cooper,et al. Higher energy collision dissociation (HCD) product ion-triggered electron transfer dissociation (ETD) mass spectrometry for the analysis of N-linked glycoproteins. , 2012, Journal of proteome research.
[35] Martin R Larsen,et al. Chemical deamidation: a common pitfall in large-scale N-linked glycoproteomic mass spectrometry-based analyses. , 2012, Journal of proteome research.
[36] Xiaoping Du,et al. Inside-out, outside-in, and inside-outside-in: G protein signaling in integrin-mediated cell adhesion, spreading, and retraction. , 2012, Current opinion in cell biology.
[37] Nichollas E. Scott,et al. Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity. , 2013, Journal of proteome research.
[38] Heather Desaire,et al. Software for automated interpretation of mass spectrometry data from glycans and glycopeptides. , 2013, The Analyst.
[39] T. Nikaido,et al. Total cellular glycomics allows characterizing cells and streamlining the discovery process for cellular biomarkers , 2013, Proceedings of the National Academy of Sciences.
[40] D. Figeys,et al. Site-specific characterization of cell membrane N-glycosylation with integrated hydrophilic interaction chromatography solid phase extraction and LC-MS/MS. , 2014, Journal of proteomics.
[41] J. Shendure,et al. A new congenital disorder of glycosylation caused by a mutation in SSR4, the signal sequence receptor 4 protein of the TRAP complex. , 2014, Human molecular genetics.
[42] F. He,et al. Efficient and accurate glycopeptide identification pipeline for high-throughput site-specific N-glycosylation analysis. , 2014, Journal of proteome research.
[43] Haixu Tang,et al. Computational framework for identification of intact glycopeptides in complex samples. , 2014, Analytical chemistry.
[44] 陈锐,et al. Comprehensive Mapping of Protein N‑Glycosylation in Human Liver by Combining Hydrophilic Interaction Chromatography and Hydrazide Chemistry , 2014 .
[45] Mark R. Chance,et al. Reliable Determination of Site-Specific In Vivo Protein N-Glycosylation Based on Collision-Induced MS/MS and Chromatographic Retention Time , 2014, Journal of the American Society for Mass Spectrometry.
[46] Raymond A. Dwek,et al. Emerging Principles for the Therapeutic Exploitation of Glycosylation , 2014, Science.