Multiscale community geometry in a network and its application.

We introduce a between-ness-based distance metric to extract local and global information for each pair of nodes (or "vertices" used interchangeably) located in a binary network. Since this distance then superimposes a weighted graph upon such a binary network, a multiscale clustering mechanism, called data cloud geometry, is applicable to discover hierarchical communities within a binary network. This approach resolves many shortcomings of community finding approaches, which are primarily based on modularity optimization. Using several contrived and real binary networks, our community hierarchies compare favorably with results derived from a recently proposed approach based on time-scale differences of random walks and has already demonstrated significant improvements over module-based approaches, especially on the multiscale and the determination of the number of communities.

[1]  Albert-László Barabási,et al.  Statistical mechanics of complex networks , 2001, ArXiv.

[2]  Albert-László Barabási,et al.  Hierarchical organization in complex networks. , 2003, Physical review. E, Statistical, nonlinear, and soft matter physics.

[3]  Pascal Pons,et al.  Post-processing hierarchical community structures: Quality improvements and multi-scale view , 2006, Theor. Comput. Sci..

[4]  R. May,et al.  Systemic risk: the dynamics of model banking systems , 2010, Journal of The Royal Society Interface.

[5]  Roma,et al.  Fitness model for the Italian interbank money market. , 2006, Physical review. E, Statistical, nonlinear, and soft matter physics.

[6]  D. Lusseau,et al.  The bottlenose dolphin community of Doubtful Sound features a large proportion of long-lasting associations , 2003, Behavioral Ecology and Sociobiology.

[7]  S. Shen-Orr,et al.  Network motifs: simple building blocks of complex networks. , 2002, Science.

[8]  A. Barabasi,et al.  Hierarchical Organization of Modularity in Metabolic Networks , 2002, Science.

[9]  T. Vicsek,et al.  Uncovering the overlapping community structure of complex networks in nature and society , 2005, Nature.

[10]  S. Shen-Orr,et al.  Network motifs in the transcriptional regulation network of Escherichia coli , 2002, Nature Genetics.

[11]  A. Barabasi,et al.  Lethality and centrality in protein networks , 2001, Nature.

[12]  A. Barabasi,et al.  The topology of the transcription regulatory network in the yeast , 2002, cond-mat/0205181.

[13]  M. Newman,et al.  Finding community structure in networks using the eigenvectors of matrices. , 2006, Physical review. E, Statistical, nonlinear, and soft matter physics.

[14]  R. Solé,et al.  Topological properties of food webs: from real data to community assembly models Oikos 102 , 2003 .

[15]  P. Bourgine,et al.  Topological and causal structure of the yeast transcriptional regulatory network , 2002, Nature Genetics.

[16]  M. Fiedler A property of eigenvectors of nonnegative symmetric matrices and its application to graph theory , 1975 .

[17]  Alex Arenas,et al.  Analysis of the structure of complex networks at different resolution levels , 2007, physics/0703218.

[18]  M E J Newman,et al.  Modularity and community structure in networks. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[19]  A. Cho,et al.  Ourselves and our interactions: the ultimate physics problem? , 2009, Science.

[20]  Hsieh Fushing,et al.  Time, temperature, and data cloud geometry. , 2010, Physical review. E, Statistical, nonlinear, and soft matter physics.

[21]  Jean-Charles Delvenne,et al.  Stability of graph communities across time scales , 2008, Proceedings of the National Academy of Sciences.

[22]  Claudio Castellano,et al.  Defining and identifying communities in networks. , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[23]  P. Ronhovde,et al.  Local resolution-limit-free Potts model for community detection. , 2008, Physical review. E, Statistical, nonlinear, and soft matter physics.

[24]  M E J Newman,et al.  Community structure in social and biological networks , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[25]  W. Zachary,et al.  An Information Flow Model for Conflict and Fission in Small Groups , 1977, Journal of Anthropological Research.

[26]  Daniel J. Brass,et al.  Network Analysis in the Social Sciences , 2009, Science.

[27]  S. Fortunato,et al.  Resolution limit in community detection , 2006, Proceedings of the National Academy of Sciences.

[28]  Andrea Lancichinetti,et al.  Community detection algorithms: a comparative analysis: invited presentation, extended abstract , 2009, VALUETOOLS.