Structural analyses of the ankyrin repeat domain of TRPV6 and related TRPV ion channels.

Transient receptor potential (TRP) proteins are cation channels composed of a transmembrane domain flanked by large N- and C-terminal cytoplasmic domains. All members of the vanilloid family of TRP channels (TRPV) possess an N-terminal ankyrin repeat domain (ARD). The ARD of mammalian TRPV6, an important regulator of calcium uptake and homeostasis, is essential for channel assembly and regulation. The 1.7 A crystal structure of the TRPV6-ARD reveals conserved structural elements unique to the ARDs of TRPV proteins. First, a large twist between the fourth and fifth repeats is induced by residues conserved in all TRPV ARDs. Second, the third finger loop is the most variable region in sequence, length and conformation. In TRPV6, a number of putative regulatory phosphorylation sites map to the base of this third finger. Size exclusion chromatography and crystal packing indicate that the TRPV6-ARD does not assemble as a tetramer and is monomeric in solution. Adenosine triphosphate-agarose and calmodulin-agarose pull-down assays show that the TRPV6-ARD does not interact with either ligand, indicating a different functional role for the TRPV6-ARD than in the paralogous thermosensitive TRPV1 channel. Similar biochemical findings are also presented for the highly homologous mammalian TRPV5-ARD. The implications of the structural and biochemical data on the role of the ankyrin repeats in different TRPV channels are discussed.

[1]  N. Prevarskaya,et al.  TRPV6 channel controls prostate cancer cell proliferation via Ca2+/NFAT-dependent pathways , 2007, Oncogene.

[2]  R. D. Nerenz,et al.  Characterizing Early Events Associated with the Activation of Target Genes by 1,25-Dihydroxyvitamin D3 in Mouse Kidney and Intestine in Vivo* , 2007, Journal of Biological Chemistry.

[3]  D. Schreiner,et al.  Identification of tyrosines in the putative regulatory site of the Ca2+ channel TRPV6. , 2007, Cell calcium.

[4]  Xiangshu Jin,et al.  The Ankyrin Repeats of TRPV1 Bind Multiple Ligands and Modulate Channel Sensitivity , 2007, Neuron.

[5]  E. Procko,et al.  Insights into the Roles of Conserved and Divergent Residues in the Ankyrin Repeats of TRPV Ion Channels , 2007, Channels.

[6]  Alan R Lowe,et al.  Rational redesign of the folding pathway of a modular protein , 2007, Proceedings of the National Academy of Sciences.

[7]  Peter G. Wolynes,et al.  Stabilizing IκBα by “Consensus” Design , 2007 .

[8]  Eric Blanc,et al.  Automated structure solution with autoSHARP. , 2007, Methods in molecular biology.

[9]  Peter G Wolynes,et al.  Stabilizing IkappaBalpha by "consensus" design. , 2007, Journal of molecular biology.

[10]  H. Kahr,et al.  Dynamic but not constitutive association of calmodulin with rat TRPV6 channels enables fine tuning of Ca2+‐dependent inactivation , 2006, The Journal of physiology.

[11]  Rachelle Gaudet,et al.  Structure of the N-terminal Ankyrin Repeat Domain of the TRPV2 Ion Channel* , 2006, Journal of Biological Chemistry.

[12]  Andreas Kreusch,et al.  Crystal structure of the human TRPV2 channel ankyrin repeat domain , 2006, Protein science : a publication of the Protein Society.

[13]  Sungtae Kim,et al.  The human transient receptor potential vanilloid type 6 distal promoter contains multiple vitamin D receptor binding sites that mediate activation by 1,25-dihydroxyvitamin D3 in intestinal cells. , 2006, Molecular endocrinology.

[14]  J. Hoenderop,et al.  Interaction of the epithelial Ca2+ channels TRPV5 and TRPV6 with the intestine- and kidney-enriched PDZ protein NHERF4 , 2006, Pflügers Archiv.

[15]  V. Flockerzi,et al.  TRPV6 potentiates calcium-dependent cell proliferation. , 2006, Cell calcium.

[16]  S. V. D. van de Graaf,et al.  Direct Interaction with Rab11a Targets the Epithelial Ca2+ Channels TRPV5 and TRPV6 to the Plasma Membrane , 2006, Molecular and Cellular Biology.

[17]  B. Nilius,et al.  Structure-function relationship of the TRP channel superfamily. , 2006, Reviews of physiology, biochemistry and pharmacology.

[18]  Craig Montell,et al.  International Union of Pharmacology. XLIX. Nomenclature and Structure-Function Relationships of Transient Receptor Potential Channels , 2005, Pharmacological Reviews.

[19]  W. Liedtke,et al.  Functionality of the TRPV subfamily of TRP ion channels: add mechano-TRP and osmo-TRP to the lexicon! , 2005, Cellular and Molecular Life Sciences CMLS.

[20]  Bernd Nilius,et al.  TRP channels: a TR(I)P through a world of multifunctional cation channels , 2005, Pflügers Archiv.

[21]  G. Schultz,et al.  Homo- and heteromeric assembly of TRPV channel subunits , 2005, Journal of Cell Science.

[22]  Craig Montell,et al.  The TRP Superfamily of Cation Channels , 2005, Science's STKE.

[23]  J. Hoenderop,et al.  Direct Interaction with Rab 11 a Targets the Epithelial Ca 2 Channels TRPV 5 and TRPV 6 to the Plasma Membrane , 2005 .

[24]  S. V. D. van de Graaf,et al.  Molecular Determinants in TRPV5 Channel Assembly* , 2004, Journal of Biological Chemistry.

[25]  Kevin Cowtan,et al.  research papers Acta Crystallographica Section D Biological , 2005 .

[26]  B. Nilius,et al.  Invertebrate TRP proteins as functional models for mammalian channels , 2004, Pflügers Archiv.

[27]  V. Flockerzi,et al.  Ca2+-selective Transient Receptor Potential V Channel Architecture and Function Require a Specific Ankyrin Repeat* , 2004, Journal of Biological Chemistry.

[28]  A. Weidema,et al.  Regulation of the Mouse Epithelial Ca2+ Channel TRPV6 by the Ca2+-sensor Calmodulin* , 2004, Journal of Biological Chemistry.

[29]  Daniel C. Desrosiers,et al.  The ankyrin repeat as molecular architecture for protein recognition , 2004, Protein science : a publication of the Protein Society.

[30]  David E. Clapham,et al.  TRP channels as cellular sensors , 2003, Nature.

[31]  Doug Barrick,et al.  Structure and stability of the ankyrin domain of the Drosophila Notch receptor , 2003, Protein science : a publication of the Protein Society.

[32]  V. Flockerzi,et al.  Expression of the Ca2+-selective cation channel TRPV6 in human prostate cancer: a novel prognostic marker for tumor progression , 2003, Oncogene.

[33]  Andreas Plückthun,et al.  Designing repeat proteins: well-expressed, soluble and stable proteins from combinatorial libraries of consensus ankyrin repeat proteins. , 2003, Journal of molecular biology.

[34]  B. Nilius,et al.  The epithelial calcium channels, TRPV5 & TRPV6: from identification towards regulation. , 2003, Cell calcium.

[35]  C. Montell The venerable inveterate invertebrate TRP channels. , 2003, Cell calcium.

[36]  B. Nilius,et al.  Epithelial calcium channels: from identification to function and regulation , 2003, Pflügers Archiv.

[37]  B. Nilius,et al.  Homo‐ and heterotetrameric architecture of the epithelial Ca2+ channels TRPV5 and TRPV6 , 2003, The EMBO journal.

[38]  Richard J Morris,et al.  ARP/wARP and automatic interpretation of protein electron density maps. , 2003, Methods in enzymology.

[39]  R. Vennekens,et al.  The carboxyl terminus of the epithelial Ca2+ channel ECaC1 is involved in Ca2+-dependent inactivation , 2003, Pflügers Archiv.

[40]  Z. Peng,et al.  Consensus-derived structural determinants of the ankyrin repeat motif , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[41]  C. Montell,et al.  The TRP Channels, a Remarkably Functional Family , 2002, Cell.

[42]  A. Bohm,et al.  Crystallization and preliminary X-ray study of the edema factor exotoxin adenylyl cyclase domain from Bacillus anthracis in the presence of its activator, calmodulin. , 2001, Acta crystallographica. Section D, Biological crystallography.

[43]  C. Montell Physiology, Phylogeny, and Functions of the TRP Superfamily of Cation Channels , 2001, Science's STKE.

[44]  V. Flockerzi,et al.  Expression of CaT-like, a Novel Calcium-selective Channel, Correlates with the Malignancy of Prostate Cancer* , 2001, The Journal of Biological Chemistry.

[45]  V. Flockerzi,et al.  Competitive regulation of CaT-like-mediated Ca2+ entry by protein kinase C and calmodulin , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[46]  R. Vennekens,et al.  Permeation and Gating Properties of the Novel Epithelial Ca2+ Channel* , 2000, The Journal of Biological Chemistry.

[47]  Anastassis Perrakis,et al.  Automated protein model building combined with iterative structure refinement , 1999, Nature Structural Biology.

[48]  V S Lamzin,et al.  wARP: improvement and extension of crystallographic phases by weighted averaging of multiple-refined dummy atomic models. , 1997, Acta crystallographica. Section D, Biological crystallography.

[49]  G. Murshudov,et al.  Refinement of macromolecular structures by the maximum-likelihood method. , 1997, Acta crystallographica. Section D, Biological crystallography.

[50]  N. Pavletich,et al.  Structure of the p53 Tumor Suppressor Bound to the Ankyrin and SH3 Domains of 53BP2 , 1996, Science.