Spatially Explicit Metrics of Species Diversity, Functional Diversity, and Phylogenetic Diversity: Insights into Plant Community Assembly Processes
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Thorsten Wiegand | Nathan J. B. Kraft | María Uriarte | Nathan J B Kraft | Fangliang He | Xugao Wang | M. Uriarte | F. He | T. Wiegand | Xugao Wang | Guochun Shen | Guochun Shen
[1] David L. Erickson,et al. Trait similarity, shared ancestry and the structure of neighbourhood interactions in a subtropical wet forest: implications for community assembly. , 2010, Ecology letters.
[2] G. Perry,et al. Stochastic geometry best explains spatial associations among species pairs and plant functional types in species‐rich shrublands , 2014 .
[3] Stephen P Hubbell,et al. Asymmetric Density Dependence Shapes Species Abundances in a Tropical Tree Community , 2010, Science.
[4] M. Fortin,et al. Spatial pattern and ecological analysis , 1989, Vegetatio.
[5] Virgilio Gómez-Rubio,et al. Spatial Point Patterns: Methodology and Applications with R , 2016 .
[6] S. Levin. THE PROBLEM OF PATTERN AND SCALE IN ECOLOGY , 1992 .
[7] David Kenfack,et al. A general framework for the distance–decay of similarity in ecological communities , 2008, Ecology letters.
[8] B. McGill. Towards a unification of unified theories of biodiversity. , 2010, Ecology letters.
[9] Widespread density-dependent seedling mortality promotes species coexistence in a highly diverse Amazonian rain forest. , 2010, Ecology.
[10] Andreas Huth,et al. Statistical inference for stochastic simulation models--theory and application. , 2011, Ecology letters.
[11] Matthew R. Helmus,et al. Separating the determinants of phylogenetic community structure. , 2007, Ecology letters.
[12] S. Reed,et al. Tree species control rates of free-living nitrogen fixation in a tropical rain forest. , 2008, Ecology.
[13] C. Canham,et al. A neighborhood analysis of canopy tree competition : effects of shading versus crowding , 2004 .
[14] Andreas Huth,et al. Moving beyond abundance distributions: neutral theory and spatial patterns in a tropical forest , 2015, Proceedings of the Royal Society B: Biological Sciences.
[15] M. Uriarte,et al. Effects of forest fragmentation on the seedling recruitment of a tropical herb: assessing seed vs. safe-site limitation. , 2010, Ecology.
[16] David W. Winkler,et al. 20. A Null Model for Null Models in Biogeography , 1984 .
[17] Stephen P Hubbell,et al. The phylogenetic structure of a neotropical forest tree community. , 2006, Ecology.
[18] Stephen P. Hubbell,et al. Local neighborhood effects on long-term survival of individual trees in a neotropical forest , 2001, Ecological Research.
[19] Nathan J B Kraft,et al. Plant functional traits and the multidimensional nature of species coexistence , 2015, Proceedings of the National Academy of Sciences.
[20] Werner Ulrich,et al. Intransitive competition is widespread in plant communities and maintains their species richness. , 2015, Ecology letters.
[21] Kenichiro Shimatani. Multivariate point processes and spatial variation of species diversity , 2001 .
[22] Stephen P. Hubbell,et al. Beta-Diversity in Tropical Forest Trees , 2002, Science.
[23] Charles D. Canham,et al. Natural disturbance and human land use as determinants of tropical forest dynamics: results from a forest simulator , 2009 .
[24] D. M. Newbery,et al. Evidence of species-specific neighborhood effects in the dipterocarpaceae of a Bornean rain forest , 2005 .
[25] Olivier J. Hardy,et al. Testing the spatial phylogenetic structure of local communities: statistical performances of different null models and test statistics on a locally neutral community , 2008 .
[26] Thorsten Wiegand,et al. An evaluation of the state of spatial point pattern analysis in ecology , 2016 .
[27] S. Hubbell,et al. A systematic comparison of summary characteristics for quantifying point patterns in ecology , 2013 .
[28] J. Illian,et al. Success of spatial statistics in determining underlying process in simulated plant communities , 2016 .
[29] J. Zimmerman,et al. Life‐history trade‐offs during the seed‐to‐seedling transition in a subtropical wet forest community , 2013 .
[30] François Goreaud,et al. ads Package for R: A Fast Unbiased Implementation of the K-function Family for Studying Spatial Point Patterns in Irregular-Shaped Sampling Windows , 2015 .
[31] J. Connell. Diversity and the coevolution of competitors, or the ghost of competition past , 1980 .
[32] J. Chave,et al. Phylogenetic density dependence and environmental filtering predict seedling mortality in a tropical forest. , 2012, Ecology letters.
[33] Robin L. Chazdon,et al. A trait‐mediated, neighbourhood approach to quantify climate impacts on successional dynamics of tropical rainforests , 2016 .
[34] Simon A. Levin,et al. Biologically generated spatial pattern and the coexistence of competing species , 1997 .
[35] K. R. Clarke,et al. A taxonomic distinctness index and its statistical properties , 1998 .
[36] Campbell O. Webb,et al. Exploring the Phylogenetic Structure of Ecological Communities: An Example for Rain Forest Trees , 2000, The American Naturalist.
[37] G. Perry,et al. Community‐level spatial structure supports a model of stochastic geometry in species‐rich shrublands , 2017 .
[38] Fei Lin,et al. Mechanisms underlying local functional and phylogenetic beta diversity in two temperate forests. , 2015, Ecology.
[39] D. Lieberman,et al. Nearest‐neighbor tree species combinations in tropical forest: the role of chance, and some consequences of high diversity , 2007 .
[40] M. Mayfield,et al. Opposing effects of competitive exclusion on the phylogenetic structure of communities. , 2010, Ecology letters.
[41] L. Webb,et al. Compensatory Recruitment, Growth, and Mortality as Factors Maintaining Rain Forest Tree Diversity , 1984 .
[42] J. Chave,et al. Prevalence of phylogenetic clustering at multiple scales in an African rain forest tree community , 2014 .
[43] P. Brussard,et al. Matters of scale. , 1993, Science.
[44] Nathan J B Kraft,et al. Functional trait differences influence neighbourhood interactions in a hyperdiverse Amazonian forest. , 2016, Ecology letters.
[45] A. Escudero,et al. Beyond the classical nurse species effect: diversity assembly in a Mediterranean semi‐arid dwarf shrubland , 2016 .
[46] Andreas Huth,et al. Neighborhood diversity of large trees shows independent species patterns in a mixed dipterocarp forest in Sri Lanka. , 2015, Ecology.
[47] Functional diversity through the mean trait dissimilarity: resolving shortcomings with existing paradigms and algorithms , 2016, Oecologia.
[48] Roger Bivand,et al. Community ecology in the age of multivariate multiscale spatial analysis , 2012 .
[49] Nathan J B Kraft,et al. Functional Traits and Niche-Based Tree Community Assembly in an Amazonian Forest , 2008, Science.
[50] Peter Stoll,et al. INTRASPECIFIC AGGREGATION ALTERS COMPETITIVE INTERACTIONS IN EXPERIMENTAL PLANT COMMUNITIES , 2001 .
[51] J. Plotkin,et al. Species-area curves, spatial aggregation, and habitat specialization in tropical forests. , 2000, Journal of theoretical biology.
[52] Claudia Neuhauser,et al. Spatial Dynamics in Model Plant Communities: What Do We Really Know? , 2003, The American Naturalist.
[53] Campbell O. Webb,et al. Phylogenies and Community Ecology , 2002 .
[54] Xiangcheng Mi,et al. Quantifying spatial phylogenetic structures of fully stem‐mapped plant communities , 2013 .
[55] Susanne A. Fritz,et al. A guide to phylogenetic metrics for conservation, community ecology and macroecology , 2016, Biological reviews of the Cambridge Philosophical Society.
[56] D. Ackerly,et al. A trait-based test for habitat filtering: convex hull volume. , 2006, Ecology.
[57] D. Farine,et al. Phylogenetic community structure metrics and null models: a review with new methods and software , 2015, bioRxiv.
[58] Stephen P Hubbell,et al. Neutral theory and the evolution of ecological equivalence. , 2006, Ecology.
[59] Stephan Getzin,et al. Testing the independent species’ arrangement assertion made by theories of stochastic geometry of biodiversity , 2012, Proceedings of the Royal Society B: Biological Sciences.
[60] F. Valladares,et al. Fine-scale spatial patterns and genetic structure of two co-occurring plant congeners: fingerprints of coexistence? , 2011 .
[61] N. Swenson,et al. A Phylogenetic Perspective on the Individual Species-Area Relationship in Temperate and Tropical Tree Communities , 2013, PloS one.
[62] M. Uriarte,et al. Analysis of neighborhood dynamics of forest ecosystems using likelihood methods and modeling. , 2006, Ecological applications : a publication of the Ecological Society of America.
[63] Fei Lin,et al. Phylogenetic and functional diversity area relationships in two temperate forests , 2013 .
[64] Jonathan M. Chase,et al. Navigating the multiple meanings of β diversity: a roadmap for the practicing ecologist. , 2011, Ecology letters.
[65] H. A. Peters. Neighbour‐regulated mortality: the influence of positive and negative density dependence on tree populations in species‐rich tropical forests , 2003 .
[66] P. Chesson. Mechanisms of Maintenance of Species Diversity , 2000 .
[67] J. Wiens. Spatial Scaling in Ecology , 1989 .
[68] Uta Berger,et al. Pattern-Oriented Modeling of Agent-Based Complex Systems: Lessons from Ecology , 2005, Science.
[69] N. Gotelli. Null model analysis of species co-occurrence patterns , 2000 .
[70] S. Hubbell,et al. Strong density- and diversity-related effects help to maintain tree species diversity in a neotropical forest. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[71] Andreas Huth,et al. How individual species structure diversity in tropical forests , 2007, Proceedings of the National Academy of Sciences.
[72] Campbell O. Webb,et al. Trait Evolution, Community Assembly, and the Phylogenetic Structure of Ecological Communities , 2007, The American Naturalist.
[73] S. Hubbell,et al. A spatially explicit model of sapling growth in a tropical forest: does the identity of neighbours matter? , 2004 .
[74] Stefano Allesina,et al. A competitive network theory of species diversity , 2011, Proceedings of the National Academy of Sciences.
[75] T. Wiegand,et al. Spatial patterns of tree species richness in two temperate forests , 2011 .
[76] Andreas Huth,et al. Fast calibration of a dynamic vegetation model with minimum observation data , 2015 .
[77] Campbell O. Webb,et al. Phylodiversity-dependent seedling mortality, size structure, and disease in a Bornean rain forest. , 2006, Ecology.
[78] W. Bossert,et al. The Measurement of Diversity , 2001 .
[79] S. Levin. The problem of pattern and scale in ecology , 1992 .
[80] P. R. van Gardingen,et al. An individual-based spatially explicit tree growth model for forests in East Kalimantan (Indonesian Borneo) , 2003 .
[81] J. Zimmerman,et al. A NEIGHBORHOOD ANALYSIS OF TREE GROWTH AND SURVIVAL IN A HURRICANE‐DRIVEN TROPICAL FOREST , 2004 .
[82] Steven W Kembel,et al. Disentangling niche and neutral influences on community assembly: assessing the performance of community phylogenetic structure tests. , 2009, Ecology letters.
[83] Norman A. Bourg,et al. CTFS‐ForestGEO: a worldwide network monitoring forests in an era of global change , 2015, Global change biology.
[84] Andreas Huth,et al. Do abundance distributions and species aggregation correctly predict macroecological biodiversity patterns in tropical forests? , 2016, Global ecology and biogeography : a journal of macroecology.
[85] J. Cavender-Bares,et al. Phylogenetic Overdispersion in Floridian Oak Communities , 2004, The American Naturalist.
[86] Nathan J B Kraft,et al. Stochastic dilution effects weaken deterministic effects of niche-based processes in species rich forests. , 2016, Ecology.
[87] Nathan J B Kraft,et al. The Assembly of Plant Communities , 2014 .
[88] Eliot J. B. McIntire,et al. Beyond description: the active and effective way to infer processes from spatial patterns. , 2009, Ecology.
[89] Jonathan M. Chase,et al. The metacommunity concept: a framework for multi-scale community ecology , 2004 .
[90] O. Hardy,et al. Characterizing the phylogenetic structure of communities by an additive partitioning of phylogenetic diversity , 2007 .
[91] P. Legendre. Spatial Autocorrelation: Trouble or New Paradigm? , 1993 .
[92] Peter Kareiva,et al. Spatial ecology : the role of space in population dynamics and interspecific interactions , 1998 .
[93] Campbell O. Webb,et al. Picante: R tools for integrating phylogenies and ecology , 2010, Bioinform..
[94] Hans-Hermann Gerdes,et al. Functional Traits and Niche-Based Tree Community Assembly in an Amazonian Forest , 2008 .
[95] M. Uriarte,et al. Trait-mediated assembly processes predict successional changes in community diversity of tropical forests , 2014, Proceedings of the National Academy of Sciences.
[96] Richard Condit,et al. Tropical Forest Census Plots , 1998, Environmental Intelligence Unit.
[97] Nathan J B Kraft,et al. Community assembly, coexistence and the environmental filtering metaphor , 2015 .
[98] Calum Brown,et al. Linking ecological processes with spatial and non‐spatial patterns in plant communities , 2011 .
[99] Xiangcheng Mi,et al. Species-area relationships explained by the joint effects of dispersal limitation and habitat heterogeneity. , 2009, Ecology.
[100] Daniel Simberloff,et al. The Assembly of Species Communities: Chance or Competition? , 1979 .
[101] J. Zimmerman,et al. Linking spatial patterns of leaf litterfall and soil nutrients in a tropical forest: a neighborhood approach. , 2015, Ecological applications : a publication of the Ecological Society of America.
[102] A. G. Valk,et al. Succession in Wetlands: A Gleasonian Appraoch , 1981 .
[103] P. Diggle,et al. Spatial patterns reveal negative density dependence and habitat associations in tropical trees. , 2011, Ecology.
[104] F. Valladares,et al. Competition may explain the fine‐scale spatial patterns and genetic structure of two co‐occurring plant congeners , 2011 .
[105] Calyampudi R. Rao. Diversity and dissimilarity coefficients: A unified approach☆ , 1982 .
[106] D. Coomes,et al. Competitive interactions between forest trees are driven by species' trait hierarchy, not phylogenetic or functional similarity: implications for forest community assembly. , 2012, Ecology letters.
[107] N. Swenson. Phylogenetic Beta Diversity Metrics, Trait Evolution and Inferring the Functional Beta Diversity of Communities , 2011, PloS one.