Multiscale framework for biomedical simulation from molecular dynamics to continuum mechanics
暂无分享,去创建一个
Wing Kam Liu | Dean Ho | Hyo-Jin Kim | Paolo Decuzzi | Moon Ki Kim | Jae Hyun Chung | Tae-Rin Lee | Adrian M. Kopacz | Wylie Stroberg | Han B. Man | Wing Kam Liu | P. Decuzzi | M. Kim | W. Stroberg | Tae-Rin Lee | H. Man | D. Ho | J. Chung | Hyo-Jin Kim
[1] C. A. Marsh,et al. Fokker-Planck-Boltzmann equation for dissipative particle dynamics , 1997 .
[2] Eric Jakobsson,et al. A Coarse-Grained Model Based on Morse Potential for Water and n-Alkanes. , 2010, Journal of chemical theory and computation.
[3] Robert L Jernigan,et al. Rigid-cluster models of conformational transitions in macromolecular machines and assemblies. , 2005, Biophysical journal.
[4] Ted Belytschko,et al. Arbitrary Lagrangian-Eulerian Petrov-Galerkin finite elements for nonlinear continua , 1988 .
[5] G. Chirikjian,et al. Elastic models of conformational transitions in macromolecules. , 2002, Journal of molecular graphics & modelling.
[6] Wing Kam Liu,et al. Meshfree and particle methods and their applications , 2002 .
[7] Pep Español,et al. Dissipative particle dynamics for interacting multicomponent systems , 1997 .
[8] Lucy T. Zhang,et al. Immersed finite element method , 2004 .
[9] B. Henrich,et al. An adhesive DPD wall model for dynamic wetting , 2007 .
[10] P. Español,et al. Statistical Mechanics of Dissipative Particle Dynamics. , 1995 .
[11] Wing Kam Liu,et al. Immersed finite element method for rigid body motions in the incompressible Navier–Stokes flow , 2008 .
[12] Wing Kam Liu,et al. Dielectrophoretic assembly of nanowires. , 2006, The journal of physical chemistry. B.
[13] J. Koelman,et al. Simulating microscopic hydrodynamic phenomena with dissipative particle dynamics , 1992 .
[14] Ted Belytschko,et al. Immersed electrokinetic finite element method , 2007 .
[15] David Farrell,et al. Immersed finite element method and its applications to biological systems. , 2006, Computer methods in applied mechanics and engineering.
[16] Adrian M. Kopacz. Immersed Molecular Electrokinetic Finite Element Method for the Analysis of Pathogen Screening Nanotip Sensor , 2011 .
[17] Neelesh A. Patankar,et al. The immersed molecular finite element method , 2012 .
[18] Moon Ki Kim,et al. Using Harmonic Analysis and Optimization to Study Macromolecular Dynamics , 2006 .
[19] M. Jacobs,et al. Diagnostic microbiology and therapeutic drug monitoring in pediatric infectious diseases. , 1983, Pediatric clinics of North America.
[20] Dean Ho,et al. Polymer-functionalized Nanodiamond Platforms as Vehicles for Gene Delivery Keywords: Nanodiamonds · Gene Delivery · Nanocarrier · Transfection · Low Molecular Weight Polyethyleneimine (lmw Pei) , 2022 .
[21] Lucy T. Zhang,et al. On computational issues of immersed finite element methods , 2009, J. Comput. Phys..
[22] James J Riley,et al. Fluid flow-assisted dielectrophoretic assembly of nanowires. , 2007, Langmuir : the ACS journal of surfaces and colloids.
[23] P. B. Warren,et al. DISSIPATIVE PARTICLE DYNAMICS : BRIDGING THE GAP BETWEEN ATOMISTIC AND MESOSCOPIC SIMULATION , 1997 .
[24] G. Chirikjian,et al. Efficient generation of feasible pathways for protein conformational transitions. , 2002, Biophysical journal.
[25] Wing Kam Liu,et al. Mathematical foundations of the immersed finite element method , 2006 .
[26] Long Chen. FINITE ELEMENT METHOD , 2013 .
[27] Yaling Liu,et al. Rheology of red blood cell aggregation by computer simulation , 2006, J. Comput. Phys..
[28] Moti Lal,et al. Dynamics of a drop at a liquid/solid interface in simple shear fields: A mesoscopic simulation study , 1999 .
[29] Lucy T. Zhang,et al. Coupling of Navier–Stokes equations with protein molecular dynamics and its application to hemodynamics , 2004 .
[30] Adrian M. Kopacz,et al. Simulation and prediction of endothelial cell adhesion modulated by molecular engineering , 2008 .
[31] Xuefeng Li,et al. A many-body dissipative particle dynamics study of spontaneous capillary imbibition and drainage. , 2010, Langmuir : the ACS journal of surfaces and colloids.
[32] Mauro Ferrari,et al. Geometrical confinement of gadolinium-based contrast agents in nanoporous particles enhances T1 contrast , 2010, Nature nanotechnology.
[33] Cheng Ling Chang,et al. Manipulation of nanoparticles and biomolecules by electric field and surface tension , 2008 .
[34] Gregory S Chirikjian,et al. A Comparison Between Elastic Network Interpolation and MD Simulation of 16S Ribosomal RNA , 2003, Journal of biomolecular structure & dynamics.
[35] Brandon J. Tefft,et al. Enhancing Endothelial Cell Retention on ePTFE Constructs by siRNA-Mediated SHP-1 Gene , 2011 .
[36] C. Peskin. The immersed boundary method , 2002, Acta Numerica.
[37] Español,et al. Hydrodynamics from dissipative particle dynamics. , 1995, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics.
[38] G. Chirikjian,et al. An elastic network model of HK97 capsid maturation. , 2003, Journal of structural biology.
[39] Wing Kam Liu,et al. Extended immersed boundary method using FEM and RKPM , 2004 .
[40] M. H. Ernst,et al. Static and dynamic properties of dissipative particle dynamics , 1997, cond-mat/9702036.
[41] Markus J. Buehler,et al. Mesoscale modeling of mechanics of carbon nanotubes: Self-assembly, self-folding, and fracture , 2006 .
[42] Wing Kam Liu,et al. Nonlinear Finite Elements for Continua and Structures , 2000 .
[43] C. Lim,et al. Mechanics of the human red blood cell deformed by optical tweezers , 2003 .
[44] George C Schatz,et al. Atomistic simulation and measurement of pH dependent cancer therapeutic interactions with nanodiamond carrier. , 2011, Molecular pharmaceutics.
[45] D I Dimitrov,et al. Capillary rise in nanopores: molecular dynamics evidence for the Lucas-Washburn equation. , 2007, Physical review letters.
[46] Charles S. Peskin,et al. Flow patterns around heart valves: a digital computer method for solving the equations of motion , 1973 .
[47] Lucy T. Zhang,et al. Stent modeling using immersed finite element method , 2006 .
[48] Yoon-Suk Chang,et al. Numerical simulation of a nanoparticle focusing lens in a microfluidic channel by using immersed finite element method. , 2009, Journal of nanoscience and nanotechnology.
[49] Y. C. Fung,et al. Improved measurements of the erythrocyte geometry. , 1972, Microvascular research.
[50] W. Freeman,et al. Porous silicon in drug delivery devices and materials. , 2008, Advanced drug delivery reviews.
[51] Min Jung Kwon,et al. Long acting porous microparticle for pulmonary protein delivery. , 2007, International journal of pharmaceutics.
[52] Wing Kam Liu,et al. The immersed/fictitious element method for fluid–structure interaction: Volumetric consistency, compressibility and thin members , 2008 .