Singular spectrum analysis improves analysis of local field potentials from macaque V1 in active fixation task

Local field potentials (LFPs) represent the relatively slow varying components of the neural signal, and their analysis is instrumental in understanding normal brain function. To be properly analyzed, this signal needs to be separated in its fundamental frequency bands. Recent studies have shown that empirical mode decomposition (EMD) can be exploited to pre-process LFP recordings in order to achieve a proper separation. However, depending on the analyzed signal, EMD is known to generate components that may cover a too wide frequency range to be considered as narrow banded. As an alternative, we present here an improved version of the singular spectrum analysis (SSA) algorithm, validated by numerical simulations, and applied to LFP recordings in V1 of a macaque monkey exposed to simple visual stimuli. The components generated by the improved SSA algorithm are shown to be more meaningful than those generated by EMD, paving the way for its use in LFP analysis.

[1]  Sadik Kara,et al.  Singular Spectrum Analysis of Sleep EEG in Insomnia , 2011, Journal of Medical Systems.

[2]  Paul B. Colditz,et al.  A computer-aided detection of EEG seizures in infants: a singular-spectrum approach and performance comparison , 2002, IEEE Transactions on Biomedical Engineering.

[3]  Hualou Liang,et al.  Empirical mode decomposition of field potentials from macaque V4 in visual spatial attention , 2005, Biological Cybernetics.

[4]  P. Fries A mechanism for cognitive dynamics: neuronal communication through neuronal coherence , 2005, Trends in Cognitive Sciences.

[5]  David A. Leopold,et al.  Distinct Superficial and Deep Laminar Domains of Activity in the Visual Cortex during Rest and Stimulation , 2010, Front. Syst. Neurosci..

[6]  R. Desimone,et al.  Modulation of Oscillatory Neuronal Synchronization by Selective Visual Attention , 2001, Science.

[7]  Anatoly A. Zhigljavsky,et al.  Analysis of Time Series Structure - SSA and Related Techniques , 2001, Monographs on statistics and applied probability.

[8]  N. Huang,et al.  The empirical mode decomposition and the Hilbert spectrum for nonlinear and non-stationary time series analysis , 1998, Proceedings of the Royal Society of London. Series A: Mathematical, Physical and Engineering Sciences.

[9]  P. Tse,et al.  An improved Hilbert–Huang transform and its application in vibration signal analysis , 2005 .

[10]  V. Moskvina,et al.  An Algorithm Based on Singular Spectrum Analysis for Change-Point Detection , 2003 .