Characterization of stem cells using mathematical models of multistage cell lineages

Stem cells dynamics is an important field of research with promising clinical impacts. Due to the revolutionary new technologies of biological data collection, an enormous amount of information on specific factors and genes responsible for cell differentiation is available. However, the mechanisms controlling stem cell self-renewal, maintenance and differentiation are still poorly understood and there exists no general characterization of stem cells based on observable cell properties. We address these problems with the help of mathematical models. Stem cells are described as the cell type that is most responsive to certain environmental signals. This results in a dynamic characterization of stemness that depends on environmental conditions and is not necessarily linked to a unique cell population.

[1]  Rhodri Ceredig,et al.  Models of haematopoiesis: seeing the wood for the trees , 2009, Nature Reviews Immunology.

[2]  P. Lansdorp,et al.  Stem Cell Biology for the Transfusionist , 1998, Vox sanguinis.

[3]  C B Harley,et al.  Evidence for a mitotic clock in human hematopoietic stem cells: loss of telomeric DNA with age. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[4]  D. Scadden,et al.  Osteoblastic cells regulate the haematopoietic stem cell niche , 2003, Nature.

[5]  Christian J Stoeckert,et al.  A molecular profile of a hematopoietic stem cell niche , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[6]  K. Kaushansky,et al.  Lineage-specific hematopoietic growth factors. , 2006, The New England journal of medicine.

[7]  David M. Berman,et al.  Tissue repair and stem cell renewal in carcinogenesis , 2004, Nature.

[8]  Marek Kimmel,et al.  Hematopoiesis and its disorders: a systems biology approach. , 2010, Blood.

[9]  J. Dick,et al.  Stem cells: Self-renewal writ in blood , 2003, Nature.

[10]  Willi Jäger,et al.  Modeling of asymmetric cell division in hematopoietic stem cells--regulation of self-renewal is essential for efficient repopulation. , 2009, Stem cells and development.

[11]  K. Moore,et al.  Stem Cells and Their Niches , 2006, Science.

[12]  R Ohno,et al.  Granulocyte colony-stimulating factor receptor at various differentiation stages of normal and leukemic hematopoietic cells. , 1997, Leukemia & lymphoma.

[13]  Matthias Gunzer,et al.  Altered cellular dynamics and endosteal location of aged early hematopoietic progenitor cells revealed by time-lapse intravital imaging in long bones. , 2009, Blood.

[14]  David W. Rowe,et al.  Live-animal tracking of individual haematopoietic stem/progenitor cells in their niche , 2009, Nature.

[15]  Donald Metcalf,et al.  Hematopoietic cytokines. , 2008, Blood.

[16]  L. Allen Stem cells. , 2003, The New England journal of medicine.

[17]  W S Alexander,et al.  Deficiencies in progenitor cells of multiple hematopoietic lineages and defective megakaryocytopoiesis in mice lacking the thrombopoietic receptor c-Mpl. , 1996, Blood.

[18]  N. Sharpless,et al.  Stem cell aging. , 2009, The journals of gerontology. Series A, Biological sciences and medical sciences.

[19]  E. Wright,et al.  Haemopoietic stem cells: their heterogeneity and regulation , 1997, International journal of experimental pathology.

[20]  Olivier Pourquié,et al.  Control of the segmentation process by graded MAPK/ERK activation in the chick embryo. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[21]  W Mutschler,et al.  Very early posttraumatic serum alterations are significantly associated to initial massive RBC substitution, injury severity, multiple organ failure and adverse clinical outcome in multiple injured patients , 2009, European journal of medical research.

[22]  Ingo Roeder,et al.  Tissue Stem Cells: Definition, Plasticity, Heterogeneity, Self-Organization and Models – A Conceptual Approach , 2002, Cells Tissues Organs.

[23]  Peter Guttorp,et al.  Hematopoietic stem-cell behavior in nonhuman primates. , 2007, Blood.

[24]  Christian Klämbt,et al.  Switch in FGF signalling initiates glial differentiation in the Drosophila eye , 2009, Nature.

[25]  S. Korsching,et al.  The neurotrophic factor concept: a reexamination , 1993, The Journal of neuroscience : the official journal of the Society for Neuroscience.

[26]  Kim Nasmyth,et al.  The cell cycle , 2011, Philosophical Transactions of the Royal Society B: Biological Sciences.

[27]  Angela C. Colmone,et al.  Leukemic Cells Create Bone Marrow Niches That Disrupt the Behavior of Normal Hematopoietic Progenitor Cells , 2008, Science.

[28]  Linheng Li,et al.  Understanding hematopoietic stem-cell microenvironments. , 2006, Trends in biochemical sciences.

[29]  Sean J Morrison,et al.  Mechanisms of stem cell self-renewal. , 2009, Annual review of cell and developmental biology.

[30]  A R Dunn,et al.  Mice lacking granulocyte colony-stimulating factor have chronic neutropenia, granulocyte and macrophage progenitor cell deficiency, and impaired neutrophil mobilization. , 1994, Blood.

[31]  Winfried Wiegraebe,et al.  Detection of Functional Hematopoietic Stem Cell Niche Using Real-Time Imaging , 2008 .

[32]  Winfried Wiegraebe,et al.  Detection of functional haematopoietic stem cell niche using real-time imaging , 2009, Nature.

[33]  D. Bonnet,et al.  Ageing within the hematopoietic stem cell compartment , 2009, Mechanisms of Ageing and Development.

[34]  Philipp S. Hoppe,et al.  Hematopoietic Cytokines Can Instruct Lineage Choice , 2009, Science.

[35]  D. Gilliland,et al.  Leukemia stem cells. , 2010, Seminars in cancer biology.

[36]  S. Islam,et al.  Attributes of adult stem cells , 2009, The Journal of pathology.

[37]  A. Roberts,et al.  Hematopoietic stem cell deficiencies in mice lacking c-Mpl, the receptor for thrombopoietin. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[38]  Stephan Vogt,et al.  The possible use of stem cells in regenerative medicine: dream or reality? , 2009, Langenbeck's Archives of Surgery.

[39]  A. Hsueh,et al.  Initial and cyclic recruitment of ovarian follicles. , 2000, Endocrine reviews.

[40]  Haiyang Huang,et al.  Identification of the haematopoietic stem cell niche and control of the niche size , 2003, Nature.

[41]  Alois Gratwohl,et al.  Trends of hematopoietic stem cell transplantation in the third millennium , 2009, Current opinion in hematology.

[42]  Zang Ai-hua,et al.  Stem Cells,Cancer and Cancer Stem Cells , 2005 .

[43]  J. Larry Jameson,et al.  The Cell Cycle , 1998 .

[44]  Leo Koenderman,et al.  Protein kinase B (c-akt) regulates hematopoietic lineage choice decisions during myelopoiesis. , 2008, Blood.

[45]  R. Ploemacher,et al.  Stem cells: characterization and measurement. , 1997, Bailliere's clinical haematology.

[46]  T. Graf,et al.  Heterogeneity of embryonic and adult stem cells. , 2008, Cell stem cell.

[47]  I. Lemischka,et al.  Stem Cell Biology: A View toward the Future , 2005, Annals of the New York Academy of Sciences.

[48]  T. Suda,et al.  Cancer stem cells and their niche , 2009, Cancer science.

[49]  A. Wagers,et al.  Osteolineage niche cells initiate hematopoietic stem cell mobilization. , 2008, Blood.

[50]  W. Fried,et al.  Erythropoietin and erythropoiesis. , 2009, Experimental hematology.

[51]  Ani V Das,et al.  Ciliary Neurotrophic Factor‐Mediated Signaling Regulates Neuronal Versus Glial Differentiation of Retinal Stem Cells/Progenitors by Concentration‐Dependent Recruitment of Mitogen‐Activated Protein Kinase and Janus Kinase‐Signal Transducer and Activator of Transcription Pathways in Conjunction with N , 2008, Stem cells.