High Nutritional Quality of Human-Induced Pluripotent Stem Cell-Generated Proteins through an Advanced Scalable Peptide Hydrogel 3D Suspension System

Cell-cultured protein technology has become increasingly attractive due to its sustainability and climate benefits. The aim of this study is to determine the nutritional quality of the human-induced pluripotent stem cell (hiPSC)-cultured proteins in an advanced 3D peptide hydrogel system for the highly efficient production of cell-cultured proteins. Our previous study demonstrated a PGmatrix peptide hydrogel for the 3D embedded culture of long-term hiPSC maintenance and expansion (PGmatrix-hiPSC (PG-3D)), which showed significantly superior pluripotency when compared with traditional 2D cell culture on Matrigel and/or Vitronectin and other existing 3D scaffolding systems such as Polyethylene glycol (PEG)-based hydrogels. In this study, we designed a PGmatrix 3D suspension (PG-3DSUSP) system from the PG-3D embedded system that allows scaling up a hiPSC 3D culture volume by 20 times (e.g., from 0.5 mL to 10 mL). The results indicated that the PG-3DSUSP was a competitive system compared to the well-established PG-3D embedded method in terms of cell growth performance and cell pluripotency. hiPSCs cultured in PG-3DSUSP consistently presented a 15–20-fold increase in growth and a 95–99% increase in viability across multiple passages with spheroids with a size range of 30–50 μm. The expression of pluripotency-related genes, including NANOG, OCT4, hTERT, REX1, and UTF1, in PG-3DSUSP-cultured hiPSCs was similar to or higher than that observed in a PG-3D system, suggesting continuous pluripotent maintenance. The nutritional value of the hiPSC-generated proteins from the PG-3DSUSP system was further evaluated for amino acid composition and in vitro protein digestibility. The amino acid composition of the hiPSC-generated proteins demonstrated a significantly higher essential amino acid content (39.0%) than human skeletal muscle protein (31.8%). In vitro protein digestibility of hiPSC-generated proteins was significantly higher (78.0 ± 0.7%) than that of the commercial beef protein isolate (75.7 ± 0.6%). Taken together, this is the first study to report an advanced PG-3DSUSP culture system to produce highly efficient hiPSC-generated proteins that possess more essential amino acids and better digestibility. The hiPSC-generated proteins with superior nutrition quality may be of particular significance as novel alternative proteins in food engineering and industries for future food, beverage, and supplement applications.

[1]  D. Mcclements,et al.  Digestibility and bioavailability of plant-based proteins intended for use in meat analogues: A review , 2022, Trends in Food Science & Technology.

[2]  M. Taherzadeh,et al.  Application of cell culture technology and genetic engineering for production of future foods and crop improvement to strengthen food security , 2021, Bioengineered.

[3]  A. Atala,et al.  Universal Peptide Hydrogel for Scalable Physiological Formation and Bioprinting of 3D Spheroids from Human Induced Pluripotent Stem Cells , 2021, Advanced Functional Materials.

[4]  D. Stasiak,et al.  Consumption of processed red meat and its impact on human health: A Review , 2021 .

[5]  Y. Ogawa,et al.  In vitro protein digestibility and biochemical characteristics of soaked, boiled and fermented soybeans , 2021, Scientific Reports.

[6]  X. Sun,et al.  Advances in 3D peptide hydrogel models in cancer research , 2021, npj Science of Food.

[7]  Hanne K Mæhre,et al.  Improved estimation of in vitro protein digestibility of different foods using size exclusion chromatography. , 2021, Food chemistry.

[8]  Yun-Sang Choi,et al.  Improvement of meat protein digestibility in infants and the elderly. , 2021, Food chemistry.

[9]  M. Weiler,et al.  Plant Proteins: Assessing Their Nutritional Quality and Effects on Health and Physical Function , 2020, Nutrients.

[10]  P. Jakeman,et al.  Separating the Wheat from the Chaff: Nutritional Value of Plant Proteins and Their Potential Contribution to Human Health , 2020, Nutrients.

[11]  Mark J. Post,et al.  Microcarriers for Upscaling Cultured Meat Production , 2020, Frontiers in Nutrition.

[12]  T. Kinouchi,et al.  Daily protein and energy intakes of infants fed a commercial infant formula with a reduced protein concentration of 2.2 g/100 kcal: an impact of feeding interval on energy intake , 2020, Bioscience, biotechnology, and biochemistry.

[13]  X. Sun,et al.  3D h9e peptide hydrogel: An advanced three-dimensional cell culture system for anticancer prescreening of chemopreventive phenolic agents. , 2019, Toxicology in vitro : an international journal published in association with BIBRA.

[14]  B. Carciofi,et al.  Food processing for the improvement of plant proteins digestibility , 2019, Critical reviews in food science and nutrition.

[15]  B. Evans,et al.  Accurate and efficient amino acid analysis for protein quantification using hydrophilic interaction chromatography coupled tandem mass spectrometry , 2019, Plant Methods.

[16]  L. V. van Loon,et al.  Protein content and amino acid composition of commercially available plant-based protein isolates , 2018, Amino Acids.

[17]  Marianne J. Ellis,et al.  Bringing cultured meat to market: Technical, socio-political, and regulatory challenges in cellular agriculture , 2018, Trends in food science & technology.

[18]  Stuart M Phillips,et al.  Protein Recommendations for Weight Loss in Elite Athletes: A Focus on Body Composition and Performance. , 2017, International journal of sport nutrition and exercise metabolism.

[19]  Evan W. Miller,et al.  Engineered hydrogels increase the post-transplantation survival of encapsulated hESC-derived midbrain dopaminergic neurons. , 2017, Biomaterials.

[20]  Li-Hsin Han,et al.  Modeling Physiological Events in 2D vs. 3D Cell Culture. , 2017, Physiology.

[21]  Evan W. Miller,et al.  Efficient generation of hPSC-derived midbrain dopaminergic neurons in a fully defined, scalable, 3D biomaterial platform , 2017, Scientific Reports.

[22]  K. Lamperska,et al.  2D and 3D cell cultures – a comparison of different types of cancer cell cultures , 2016, Archives of medical science : AMS.

[23]  G. Devi,et al.  Three-dimensional culture systems in cancer research: Focus on tumor spheroid model. , 2016, Pharmacology & therapeutics.

[24]  Guoyao Wu Dietary protein intake and human health. , 2016, Food & function.

[25]  D. Sabatini,et al.  Structural basis for leucine sensing by the Sestrin2-mTORC1 pathway , 2016, Science.

[26]  Xianmin Zeng,et al.  Identification of stable reference genes in differentiating human pluripotent stem cells. , 2015, Physiological genomics.

[27]  E. Volpi,et al.  Protein intake and muscle function in older adults , 2015, Current opinion in clinical nutrition and metabolic care.

[28]  Guoyao Wu,et al.  Production and supply of high‐quality food protein for human consumption: sustainability, challenges, and innovations , 2014, Annals of the New York Academy of Sciences.

[29]  David V. Schaffer,et al.  A fully defined and scalable 3D culture system for human pluripotent stem cell expansion and differentiation , 2013, Proceedings of the National Academy of Sciences.

[30]  Ioannis Delimaris,et al.  Adverse Effects Associated with Protein Intake above the Recommended Dietary Allowance for Adults , 2013, ISRN nutrition.

[31]  Danwei Huangfu,et al.  Human pluripotent stem cells: an emerging model in developmental biology , 2013, Development.

[32]  Peter A. Sopade,et al.  Particle size-starch–protein digestibility relationships in cowpea (Vigna unguiculata) , 2012 .

[33]  M. Post Cultured meat from stem cells: challenges and prospects. , 2012, Meat science.

[34]  P. Moughan,et al.  In vitro determination of dietary protein and amino acid digestibility for humans , 2012, British Journal of Nutrition.

[35]  A. Astrup,et al.  Effect of proteins from different sources on body composition. , 2011, Nutrition, metabolism, and cardiovascular diseases : NMCD.

[36]  J. Lahann,et al.  Synthetic polymer coatings for long-term growth of human embryonic stem cells , 2010, Nature Biotechnology.

[37]  M. Rennie,et al.  Distinct anabolic signalling responses to amino acids in C2C12 skeletal muscle cells , 2010, Amino Acids.

[38]  T. Anthony,et al.  The leucine content of a complete meal directs peak activation but not duration of skeletal muscle protein synthesis and mammalian target of rapamycin signaling in rats. , 2009, The Journal of nutrition.

[39]  S. Bryant,et al.  Cell encapsulation in biodegradable hydrogels for tissue engineering applications. , 2008, Tissue engineering. Part B, Reviews.

[40]  Robert Langer,et al.  Hyaluronic acid hydrogel for controlled self-renewal and differentiation of human embryonic stem cells , 2007, Proceedings of the National Academy of Sciences.

[41]  Michael J Falvo,et al.  Protein - Which is Best? , 2004, Journal of sports science & medicine.

[42]  L. D. Satterlee,et al.  A MULTIENZYME TECHNIQUE FOR ESTIMATING PROTEIN DIGESTIBILITY , 1977 .

[43]  A. I.,et al.  Neural Field Continuum Limits and the Structure–Function Partitioning of Cognitive–Emotional Brain Networks , 2023, Biology.

[44]  Yonghui Li Feeding the Future: Plant-Based Meat for Global Food Security and Environmental Sustainability , 2020, Cereal Foods World.

[45]  Quan Li Synthetic hydrogel-based 3D culture system for maintenance of human induced pluripotent stem cell , 2017 .

[46]  C. Pires,et al.  Capability of in vitro digestibility methods to predict in vivo digestibility of vegetal and animal proteins , 2016 .

[47]  Yi Yan Yang,et al.  Synthetic hydrogels for controlled stem cell differentiation , 2010 .

[48]  Miqin Zhang,et al.  Feeder-free self-renewal of human embryonic stem cells in 3D porous natural polymer scaffolds. , 2010, Biomaterials.

[49]  K. Sidhu,et al.  Alginate microcapsule for propagation and directed differentiation of hESCs to definitive endoderm. , 2010, Biomaterials.

[50]  Joint Fao Who Consultation Protein and amino acid requirements in human nutrition. , 2007, World Health Organization technical report series.