Not so optimal: The evolution of mutual information in potassium voltage-gated channels
暂无分享,去创建一个
[1] I. Nemenman,et al. Information Transduction Capacity of Noisy Biochemical Signaling Networks , 2011, Science.
[2] J. Kinney,et al. Equitability, mutual information, and the maximal information coefficient , 2013, Proceedings of the National Academy of Sciences.
[3] F. Bezanilla,et al. Gating currents from Kv7 channels carrying neuronal hyperexcitability mutations in the voltage-sensing domain. , 2012, Biophysical journal.
[4] F. Sigworth,et al. Voltage Sensitivity and Gating Charge in Shaker and Shab Family Potassium Channels , 1999, The Journal of general physiology.
[5] E. C. Rodríguez,et al. Cold hardening modulates K+ homeostasis in the brain of Drosophila melanogaster during chill coma. , 2012, Journal of insect physiology.
[6] R. Blunck,et al. S4–S5 linker movement during activation and inactivation in voltage-gated K+ channels , 2018, Proceedings of the National Academy of Sciences.
[7] John S. Wettlaufer,et al. Natural Convection, Solute Trapping, and Channel Formation during Solidification of Saltwater , 1997 .
[8] Sarah Marzen,et al. Statistical mechanics of Monod-Wyman-Changeux (MWC) models. , 2013, Journal of molecular biology.
[9] R. Greenberg,et al. Phylogeny of ion channels: clues to structure and function. , 2001, Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology.
[10] M. Covarrubias,et al. A Dipeptidyl Aminopeptidase–like Protein Remodels Gating Charge Dynamics in Kv4.2 Channels , 2006, The Journal of general physiology.
[11] C. Shannon,et al. The bandwagon (Edtl.) , 1956 .
[12] L. Pardo,et al. The EAG Voltage-Dependent K+ Channel Subfamily: Similarities and Differences in Structural Organization and Gating , 2020, Frontiers in Pharmacology.
[13] Suguru Arimoto,et al. An algorithm for computing the capacity of arbitrary discrete memoryless channels , 1972, IEEE Trans. Inf. Theory.
[14] A. Riisager,et al. Role of physiological ClC-1 Cl− ion channel regulation for the excitability and function of working skeletal muscle , 2016, The Journal of general physiology.
[15] F J Sigworth,et al. Voltage gating of ion channels , 1994, Quarterly Reviews of Biophysics.
[16] Zhenfeng Liu,et al. Thermodynamics of voltage-gated ion channels , 2018, Biophysics reports.
[17] Liam Paninski,et al. Estimation of Entropy and Mutual Information , 2003, Neural Computation.
[18] Michael Sukach. Fifth international scientific and practical conference «Transfer of Innovative Technologies 2019» , 2019 .
[19] Thomas Friedrich,et al. KCNQ4, a Novel Potassium Channel Expressed in Sensory Outer Hair Cells, Is Mutated in Dominant Deafness , 1999, Cell.
[20] Michael Mandelstam,et al. On the Bandwagon? , 2007 .
[21] Francisco Bezanilla,et al. Total Charge Movement per Channel , 1997, The Journal of general physiology.
[22] R Milkman,et al. An Escherichia coli homologue of eukaryotic potassium channel proteins. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[23] T. Jegla,et al. Evolution of the human ion channel set. , 2009, Combinatorial chemistry & high throughput screening.
[24] W. McCulloch,et al. The limiting information capacity of a neuronal link , 1952 .
[25] J. Changeux,et al. ON THE NATURE OF ALLOSTERIC TRANSITIONS: A PLAUSIBLE MODEL. , 1965, Journal of molecular biology.
[26] M. Tanouye,et al. The size of gating charge in wild-type and mutant Shaker potassium channels. , 1992, Science.
[27] H. Zakon,et al. Evolution of voltage-gated ion channels at the emergence of Metazoa , 2015, Journal of Experimental Biology.
[28] H. Lodish,et al. The Action Potential and Conduction of Electric Impulses , 2000 .
[29] A. Bayrami,et al. A Perusal on Ion Regulation and Osmotic Pressure in the Mnemiopsis Leidyi Existing in Caspian Sea , 2010 .
[30] F Bezanilla,et al. Gating currents in Shaker K+ channels. Implications for activation and inactivation models. , 1992, Biophysical journal.
[31] M. Martindale,et al. Major diversification of voltage-gated K+ channels occurred in ancestral parahoxozoans , 2015, Proceedings of the National Academy of Sciences.
[32] Gasper Tkacik,et al. Positional information, in bits , 2010, Proceedings of the National Academy of Sciences.
[33] Baron Chanda,et al. Estimating the voltage-dependent free energy change of ion channels using the median voltage for activation , 2012, The Journal of general physiology.
[34] R. Keynes. The ionic channels in excitable membranes. , 1975, Ciba Foundation symposium.
[35] G. Somjen. Ion Regulation in the Brain: Implications for Pathophysiology , 2002, The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry.
[36] A. Hodgkin,et al. A quantitative description of membrane current and its application to conduction and excitation in nerve , 1952, The Journal of physiology.
[37] F. Franciolini,et al. Simulation of Gating Currents of the Shaker K Channel Using a Brownian Model of the Voltage Sensor. , 2018, Biophysical journal.
[38] Jingyi Shi,et al. ML277 specifically enhances the fully activated open state of KCNQ1 by modulating VSD-pore coupling , 2019, eLife.
[39] I. Nemenman,et al. Cellular noise and information transmission. , 2014, Current opinion in biotechnology.
[40] A. Hodgkin,et al. The effect of sodium ions on the electrical activity of the giant axon of the squid , 1949, The Journal of physiology.
[41] S. Choe,et al. Towards the three-dimensional structure of voltage-gated potassium channels. , 1999, Trends in biochemical sciences.
[42] W. Bialek,et al. Information flow and optimization in transcriptional regulation , 2007, Proceedings of the National Academy of Sciences.
[43] Francisco Bezanilla,et al. Total Charge Movement per Channel , 1997, The Journal of general physiology.
[44] Kunqian Yu,et al. A theoretical model for calculating voltage sensitivity of ion channels and the application on Kv1.2 potassium channel. , 2012, Biophysical journal.
[45] R. MacKinnon,et al. A gating model for the archeal voltage-dependent K(+) channel KvAP in DPhPC and POPE:POPG decane lipid bilayers. , 2009, Journal of molecular biology.
[46] Michael J. Berry,et al. Predictive information in a sensory population , 2013, Proceedings of the National Academy of Sciences.
[47] Gürol M. Süel,et al. Ion channels enable electrical communication in bacterial communities , 2015, Nature.
[48] Sang Joon Kim,et al. A Mathematical Theory of Communication , 2006 .
[49] Christopher Miller. An overview of the potassium channel family , 2000, Genome Biology.
[50] Francisco Bezanilla,et al. Voltage-Sensing Residues in the S2 and S4 Segments of the Shaker K+ Channel , 1996, Neuron.
[51] R. Latorre,et al. K(+) channels: function-structural overview. , 2012, Comprehensive Physiology.
[52] Janin Riedelsberger,et al. The role of K+ channels in uptake and redistribution of potassium in the model plant Arabidopsis thaliana , 2013, Front. Plant Sci..
[53] Bertil Hille,et al. Voltage-Gated Ion Channels and Electrical Excitability , 1998, Neuron.
[54] Christoph Adami,et al. Information theory in molecular biology , 2004, q-bio/0405004.