Exploiting bacterial properties for multi-hop nanonetworks

Molecular communication is a relatively new communication paradigm for nanomachines where the communication is realized by utilizing existing biological components found in nature. In recent years researchers have proposed using bacteria to realize molecular communication because the bacteria have the ability to swim and migrate between locations, carry DNA contents (i.e. plasmids) that could be utilized for information storage, and interact and transfer plasmids to other bacteria (one of these processes is known as bacterial conjugation). However, current proposals for bacterial nanonetworks have not considered the internal structures of the nanomachines that can facilitate the use of bacteria as an information carrier. This article presents the types and functionalities of nanomachines that can be utilized in bacterial nanonetworks. A particular focus is placed on the bacterial conjugation and its support for multihop communication between nanomachines. Simulations of the communication process have also been evaluated, to analyze the quantity of bits received as well as the delay performances. Wet lab experiments have also been conducted to validate the bacterial conjugation process. The article also discusses potential applications of bacterial nanonetworks for cancer monitoring and therapy.

[1]  Eduard Alarcón,et al.  Quorum Sensing-enabled amplification for molecular nanonetworks , 2012, 2012 IEEE International Conference on Communications (ICC).

[2]  R. Austin,et al.  Bacterial metapopulations in nanofabricated landscapes , 2006, Proceedings of the National Academy of Sciences.

[3]  Raghupathy Sivakumar,et al.  When bacteria talk: Time elapse communication for super-slow networks , 2013, 2013 IEEE International Conference on Communications (ICC).

[4]  Yevgeni Koucheryavy,et al.  Forward and reverse coding for bacteria nanonetworks , 2013, 2013 First International Black Sea Conference on Communications and Networking (BlackSeaCom).

[5]  Hsian-Rong Tseng,et al.  A reversible molecular valve. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[6]  Zhiyu Wang,et al.  Validating models of bacterial chemotaxis by simulating the random motility coefficient , 2008, 2008 8th IEEE International Conference on BioInformatics and BioEngineering.

[7]  Ian F. Akyildiz,et al.  Nanonetworks: A new communication paradigm , 2008, Comput. Networks.

[8]  Ian F. Akyildiz,et al.  A new nanonetwork architecture using flagellated bacteria and catalytic nanomotors , 2010, IEEE Journal on Selected Areas in Communications.

[9]  P. Lio’,et al.  Multi-Hop Conjugation Based Bacteria Nanonetworks , 2013, IEEE Transactions on NanoBioscience.

[10]  O. Akan,et al.  An Information Theoretical Analysis of Nanoscale Molecular Gap Junction Communication Channel Between Cardiomyocytes , 2013, IEEE Transactions on Nanotechnology.

[11]  Massimiliano Pierobon,et al.  A physical end-to-end model for molecular communication in nanonetworks , 2010, IEEE Journal on Selected Areas in Communications.

[12]  O. B. Akan,et al.  Nanoscale Communication With Molecular Arrays in Nanonetworks , 2012, IEEE Transactions on NanoBioscience.

[13]  Michelle Cronin,et al.  Bacteria as vectors for gene therapy of cancer , 2010, Bioengineered bugs.

[14]  Jennifer Sturgis,et al.  Bacteria-mediated delivery of nanoparticles and cargo into cells. , 2007, Nature nanotechnology.