Genome sequencing and annotation.

[1]  H. Tettelin,et al.  Repeat‐associated phase variable genes in the complete genome sequence of Neisseria meningitidis strain MC58 , 2000, Molecular microbiology.

[2]  B. Barrell,et al.  Complete DNA sequence of a serogroup A strain of Neisseria meningitidis Z2491 , 2000, Nature.

[3]  J. Pollack,et al.  The proteome of Mycoplasma genitalium. Chaps-soluble component. , 2000, European journal of biochemistry.

[4]  Susumu Goto,et al.  KEGG: Kyoto Encyclopedia of Genes and Genomes , 2000, Nucleic Acids Res..

[5]  D. Field,et al.  Contribution of genomics to bacterial pathogenesis. , 1999, Current opinion in genetics & development.

[6]  Anton J. Enright,et al.  Protein interaction maps for complete genomes based on gene fusion events , 1999, Nature.

[7]  A Danchin,et al.  Cloning and assembly strategies in microbial genome projects. , 1999, Microbiology.

[8]  R. Overbeek,et al.  The use of gene clusters to infer functional coupling. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[9]  Michael Y. Galperin,et al.  Comparing Microbial Genomes: How the Gene Set Determines the Lifestyle , 1999 .

[10]  Jérôme Gouzy,et al.  Recent improvements of the ProDom database of protein domain families , 1999, Nucleic Acids Res..

[11]  S. Salzberg,et al.  Alignment of whole genomes. , 1999, Nucleic acids research.

[12]  N. Saunders,et al.  Implications of sequencing bacterial genomes for pathogenesis and vaccine development. , 1998, Current opinion in biotechnology.

[13]  M. Riley.  Systems for categorizing functions of gene products. , 1998, Current Opinion in Structural Biology.

[14]  Michael Y. Galperin,et al.  Sources of systematic error in functional annotation of genomes: domain rearrangement, non-orthologous gene displacement, and operon disruption , 1998, Silico Biol..

[15]  S. Karlin,et al.  Comparative DNA analysis across diverse genomes. , 1998, Annual review of genetics.

[16]  S. Salzberg,et al.  Microbial gene identification using interpolated Markov models. , 1998, Nucleic acids research.

[17]  L. Hood,et al.  Gene families: the taxonomy of protein paralogs and chimeras. , 1997, Science.

[18]  D. Lipman,et al.  A genomic perspective on protein families. , 1997, Science.

[19]  Thomas L. Madden,et al.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.

[20]  Mark Borodovsky,et al.  The complete genome sequence of the gastric pathogen Helicobacter pylori , 1997, Nature.

[21]  P. Bork,et al.  Non-orthologous gene displacement. , 1996, Trends in genetics : TIG.

[22]  R. Fleischmann,et al.  Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. , 1995, Science.

[23]  R. Doolittle.  The multiplicity of domains in proteins. , 1995, Annual review of biochemistry.

[24]  S. Henikoff,et al.  Amino acid substitution matrices from protein blocks. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[25]  E. Myers,et al.  Basic local alignment search tool. , 1990, Journal of molecular biology.