An Investigation of the Effect of Input Representation in ANFIS Modelling of Breast Cancer Survival

Intelligent Modelling and Analysis (IMA) Research Group, School of Computer ScienceThe University of Nottingham, Jubilee Campus, Wollaton Road, Nottingham, NG8 1BB, U.K.fhzh, jmgg@cs.nott.ac.ukKeywords: Adaptive neuro-fuzzy inference system, Survival analysis, Breast cancer, Nottingham prognostic index.Abstract: Fuzzy inference systems have been applied in recent years in various medical fields due to their ability toobtain good results featuring white-box models. Adaptive Neuro-Fuzzy Inference System (ANFIS), whichcombines adaptive neural network capabilities with the fuzzy logic qualitative approach, has been previouslyused in modelling survival of breast cancer patients based on patient groups derived from the NottinghamPrognostic Index (NPI), as discussed in our previous paper. In this paper, we extend our previous work toexamine whether the ANFIS model can be trained to better match the data with the NPI variable representedas a real number, rather than a categorical group. Two input models have been developed and trained withdifferent structures of ANFIS. The performance of these models, in the capability to predict the survival ratein survival of patients following operative surgery for breast cancer, is examined.

[1]  Z. Hall Cancer , 1906, The Hospital.

[2]  Lotfi A. Zadeh,et al.  Fuzzy Sets , 1996, Inf. Control..

[3]  Michio Sugeno,et al.  Industrial Applications of Fuzzy Control , 1985 .

[4]  Kathleen Steinhöfel,et al.  Artificial intelligence in medicine , 1989 .

[5]  Jyh-Shing Roger Jang,et al.  ANFIS: adaptive-network-based fuzzy inference system , 1993, IEEE Trans. Syst. Man Cybern..

[6]  E. H. Mamdani,et al.  An Experiment in Linguistic Synthesis with a Fuzzy Logic Controller , 1999, Int. J. Man Mach. Stud..

[7]  Heekuck Oh,et al.  Neural Networks for Pattern Recognition , 1993, Adv. Comput..

[8]  D. Collett Modelling survival data , 1994 .

[9]  D. Collet Modelling Survival Data in Medical Research , 2004 .

[10]  F. Harrell,et al.  Artificial neural networks improve the accuracy of cancer survival prediction , 1997, Cancer.

[11]  E Biganzoli,et al.  Feed forward neural networks for the analysis of censored survival data: a partial logistic regression approach. , 1998, Statistics in medicine.

[12]  Michael Negnevitsky,et al.  Artificial Intelligence: A Guide to Intelligent Systems , 2001 .

[13]  E. Wilkinson Cancer Research UK , 2002 .

[14]  Paulo J. G. Lisboa,et al.  A review of evidence of health benefit from artificial neural networks in medical intervention , 2002, Neural Networks.

[15]  I. Ellis,et al.  The Nottingham prognostic index in primary breast cancer , 2005, Breast Cancer Research and Treatment.

[16]  David S. Wishart,et al.  Applications of Machine Learning in Cancer Prediction and Prognosis , 2006, Cancer informatics.

[17]  Ahmet Yardimci,et al.  Soft computing in medicine , 2009, Appl. Soft Comput..

[18]  Jonathan M. Garibaldi,et al.  Adaptive neuro-fuzzy inference system (ANFIS) in modelling breast cancer survival , 2010, International Conference on Fuzzy Systems.