Prospective active marker motion correction improves statistical power in BOLD fMRI

Group level statistical maps of blood oxygenation level dependent (BOLD) signals acquired using functional magnetic resonance imaging (fMRI) have become a basic measurement for much of systems, cognitive and social neuroscience. A challenge in making inferences from these statistical maps is the noise and potential confounds that arise from the head motion that occurs within and between acquisition volumes. This motion results in the scan plane being misaligned during acquisition, ultimately leading to reduced statistical power when maps are constructed at the group level. In most cases, an attempt is made to correct for this motion through the use of retrospective analysis methods. In this paper, we use a prospective active marker motion correction (PRAMMO) system that uses radio frequency markers for real-time tracking of motion, enabling on-line slice plane correction. We show that the statistical power of the activation maps is substantially increased using PRAMMO compared to conventional retrospective correction. Analysis of our results indicates that the PRAMMO acquisition reduces the variance without decreasing the signal component of the BOLD (beta). Using PRAMMO could thus improve the overall statistical power of fMRI based BOLD measurements, leading to stronger inferences of the nature of processing in the human brain.

[1]  R. Turner,et al.  Dynamic magnetic resonance imaging of human brain activity during primary sensory stimulation. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[2]  D. Weinberger,et al.  Functional Mapping of Human Sensorimotor Cortex with 3D BOLD fMRI Correlates Highly with H215O PET rCBF , 1996, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

[3]  J. A. Derbyshire,et al.  Dynamic scan‐plane tracking using MR position monitoring , 1998, Journal of Magnetic Resonance Imaging.

[4]  Dan Rettmann,et al.  PROMO: Real‐time prospective motion correction in MRI using image‐based tracking , 2010, Magnetic resonance in medicine.

[5]  J. Pipe Motion correction with PROPELLER MRI: Application to head motion and free‐breathing cardiac imaging , 1999, Magnetic resonance in medicine.

[6]  Holger Timinger,et al.  Fast and Accurate Automatic Registration for MR-Guided Procedures Using Active Microcoils , 2007, IEEE Transactions on Medical Imaging.

[7]  K Willmes,et al.  Functional MRI for presurgical planning: problems, artefacts, and solution strategies , 2001, Journal of neurology, neurosurgery, and psychiatry.

[8]  John D E Gabrieli,et al.  Control over brain activation and pain learned by using real-time functional MRI. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[9]  Louis Lemieux,et al.  Simultaneous intracranial EEG and fMRI of interictal epileptic discharges in humans , 2011, NeuroImage.

[10]  J. Felmlee,et al.  Adaptive technique for high-definition MR imaging of moving structures. , 1989, Radiology.

[11]  Mark Jenkinson,et al.  Simulating the effects of time-varying magnetic fields with a realistic simulated scanner. , 2010, Magnetic resonance imaging.

[12]  Takashi Hanakawa,et al.  Time course and spatial distribution of fMRI signal changes during single-pulse transcranial magnetic stimulation to the primary motor cortex , 2011, NeuroImage.

[13]  A. Owen,et al.  Functional neuroimaging of the vegetative state , 2008, Nature Reviews Neuroscience.

[14]  O. Speck,et al.  Prospective Real-Time Slice-by-Slice Motion Correction for fMRI in Freely Moving Subjects , 2006, Magnetic Resonance Materials in Physics, Biology and Medicine.

[15]  M Wendt,et al.  Active MR guidance of interventional devices with target‐navigation , 2000, Magnetic resonance in medicine.

[16]  Edward F. Jackson,et al.  Real‐time motion detection of functional MRI data , 2004, Journal of applied clinical medical physics.

[17]  Jerzy P. Szaflarski,et al.  Comprehensive presurgical functional MRI language evaluation in adult patients with epilepsy , 2008, Epilepsy & Behavior.

[18]  C. Jack,et al.  Prospective multiaxial motion correction for fMRI , 2000, Magnetic resonance in medicine.

[19]  Karl J. Friston,et al.  Spatial registration and normalization of images , 1995 .

[20]  Christian Windischberger,et al.  Toward discovery science of human brain function , 2010, Proceedings of the National Academy of Sciences.

[21]  Oliver Speck,et al.  Magnetic resonance imaging of freely moving objects: prospective real-time motion correction using an external optical motion tracking system , 2006, NeuroImage.

[22]  S. Souza,et al.  Real‐time position monitoring of invasive devices using magnetic resonance , 1993, Magnetic resonance in medicine.

[23]  David Friedman,et al.  Single-trial discrimination for integrating simultaneous EEG and fMRI: Identifying cortical areas contributing to trial-to-trial variability in the auditory oddball task , 2009, NeuroImage.

[24]  J. Hajnal,et al.  Artifacts due to stimulus correlated motion in functional imaging of the brain , 1994, Magnetic resonance in medicine.

[25]  V. Calhoun,et al.  Temporal lobe and “default” hemodynamic brain modes discriminate between schizophrenia and bipolar disorder , 2008, Human brain mapping.

[26]  Karl J. Friston,et al.  Movement‐Related effects in fMRI time‐series , 1996, Magnetic resonance in medicine.

[27]  Jordan Muraskin,et al.  Echo‐planar imaging with prospective slice‐by‐slice motion correction using active markers , 2011, Magnetic resonance in medicine.

[28]  L. Freire,et al.  Motion Correction Algorithms May Create Spurious Brain Activations in the Absence of Subject Motion , 2001, NeuroImage.

[29]  Joachim Hornegger,et al.  Self-encoded Marker for Optical Prospective Head Motion Correction in MRI , 2010, MICCAI.

[30]  Ehud Rivlin,et al.  Vision-Based Tracking System for Head Motion Correction in FMRI Images , 2006, VISIGRAPP.

[31]  R Todd Constable,et al.  Functional MRI connectivity as a predictor of the surgical outcome of epilepsy , 2011, Epilepsia.

[32]  S Thesen,et al.  Prospective acquisition correction for head motion with image‐based tracking for real‐time fMRI , 2000, Magnetic resonance in medicine.

[33]  Anders M. Dale,et al.  Prospective motion correction of high-resolution magnetic resonance imaging data in children , 2010, NeuroImage.

[34]  Vinod Menon,et al.  Functional connectivity in the resting brain: A network analysis of the default mode hypothesis , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[35]  Murat Aksoy,et al.  Combined prospective and retrospective correction to reduce motion‐induced image misalignment and geometric distortions in EPI , 2013, Magnetic resonance in medicine.

[36]  M Leonardi,et al.  Functional MRI: primary motor cortex localization in patients with brain tumors. , 1996, Journal of computer assisted tomography.

[37]  James T Voyvodic,et al.  fMRI activation mapping as a percentage of local excitation: Consistent presurgical motor maps without threshold adjustment , 2009, Journal of magnetic resonance imaging : JMRI.

[38]  S. Umeyama,et al.  Least-Squares Estimation of Transformation Parameters Between Two Point Patterns , 1991, IEEE Trans. Pattern Anal. Mach. Intell..

[39]  Russell A. Poldrack,et al.  Functional imaging of sleep vertex sharp transients , 2011, Clinical Neurophysiology.

[40]  Jeffrey L Duerk,et al.  Real‐time catheter tracking and adaptive imaging , 2003, Journal of magnetic resonance imaging : JMRI.

[41]  G L Shulman,et al.  INAUGURAL ARTICLE by a Recently Elected Academy Member:A default mode of brain function , 2001 .

[42]  Sascha Krueger,et al.  Prospective real‐time correction for arbitrary head motion using active markers , 2009, Magnetic resonance in medicine.

[43]  H. Ward,et al.  Spherical navigator echoes for full 3D rigid body motion measurement in MRI , 2002 .

[44]  M. Fox,et al.  Frontiers in Systems Neuroscience Systems Neuroscience , 2022 .

[45]  Manuel Schabus,et al.  Spontaneous neural activity during human slow wave sleep , 2008, Proceedings of the National Academy of Sciences.

[46]  David Gavaghan,et al.  Development of a functional magnetic resonance imaging simulator for modeling realistic rigid‐body motion artifacts , 2006, Magnetic resonance in medicine.

[47]  P. Matthews,et al.  Neuroimaging: Applications of fMRI in translational medicine and clinical practice , 2006, Nature Reviews Neuroscience.

[48]  Fenghua Jin,et al.  Prospective head‐movement correction for high‐resolution MRI using an in‐bore optical tracking system , 2009, Magnetic resonance in medicine.

[49]  A Shankaranarayanan,et al.  A method for fast 3D tracking using tuned fiducial markers and a limited projection reconstruction FISP (LPR‐FISP) sequence , 2001, Journal of magnetic resonance imaging : JMRI.

[50]  Michael Brady,et al.  Improved Optimization for the Robust and Accurate Linear Registration and Motion Correction of Brain Images , 2002, NeuroImage.

[51]  Mark W. Woolrich,et al.  Advances in functional and structural MR image analysis and implementation as FSL , 2004, NeuroImage.

[52]  M. Czisch,et al.  Sleep Spindles and Hippocampal Functional Connectivity in Human NREM Sleep , 2011, The Journal of Neuroscience.

[53]  André J W van der Kouwe,et al.  Real‐time rigid body motion correction and shimming using cloverleaf navigators , 2006, Magnetic resonance in medicine.

[54]  Richard J. Davidson,et al.  Comparison of fMRI motion correction software tools , 2005, NeuroImage.