Evaluating dynamic bivariate correlations in resting-state fMRI: A comparison study and a new approach

To date, most functional Magnetic Resonance Imaging (fMRI) studies have assumed that the functional connectivity (FC) between time series from distinct brain regions is constant across time. However, recently, there has been an increased interest in quantifying possible dynamic changes in FC during fMRI experiments, as it is thought that this may provide insight into the fundamental workings of brain networks. In this work we focus on the specific problem of estimating the dynamic behavior of pair-wise correlations between time courses extracted from two different regions of the brain. We critique the commonly used sliding-window technique, and discuss some alternative methods used to model volatility in the finance literature that could also prove to be useful in the neuroimaging setting. In particular, we focus on the Dynamic Conditional Correlation (DCC) model, which provides a model-based approach towards estimating dynamic correlations. We investigate the properties of several techniques in a series of simulation studies and find that DCC achieves the best overall balance between sensitivity and specificity in detecting dynamic changes in correlations. We also investigate its scalability beyond the bivariate case to demonstrate its utility for studying dynamic correlations between more than two brain regions. Finally, we illustrate its performance in an application to test-retest resting state fMRI data.

[1]  Martin A. Lindquist,et al.  Detecting functional connectivity change points for single-subject fMRI data , 2013, Front. Comput. Neurosci..

[2]  R. Engle Dynamic Conditional Correlation , 2002 .

[3]  T. Bollerslev,et al.  Generalized autoregressive conditional heteroskedasticity , 1986 .

[4]  Martin A. Lindquist,et al.  Brain mediators of cardiovascular responses to social threat Part I: Reciprocal dorsal and ventral sub-regions of the medial prefrontal cortex and heart-rate reactivity , 2009, NeuroImage.

[5]  Emery N. Brown,et al.  Locally Regularized Spatiotemporal Modeling and Model Comparison for Functional MRI , 2001, NeuroImage.

[6]  P. Hansen,et al.  A Forecast Comparison of Volatility Models: Does Anything Beat a Garch(1,1)? , 2004 .

[7]  David T. Jones,et al.  Nonstationarity in the ‘resting brain's’ modular architecture , 2012, Alzheimer's & Dementia.

[8]  P. Cohen,et al.  Applied data analytic techniques for turning points research , 2012 .

[9]  M. Lindquist The Statistical Analysis of fMRI Data. , 2008, 0906.3662.

[10]  Catie Chang,et al.  Time–frequency dynamics of resting-state brain connectivity measured with fMRI , 2010, NeuroImage.

[11]  Martin A. Lindquist,et al.  Application of change point theory to modeling staterelated activity in fmri , 2012 .

[12]  L. Bauwens,et al.  Multivariate GARCH Models: A Survey , 2003 .

[13]  R. Engle Autoregressive conditional heteroscedasticity with estimates of the variance of United Kingdom inflation , 1982 .

[14]  David A. Leopold,et al.  Dynamic functional connectivity: Promise, issues, and interpretations , 2013, NeuroImage.

[15]  Hillary D. Schwarb,et al.  Short‐time windows of correlation between large‐scale functional brain networks predict vigilance intraindividually and interindividually , 2013, Human brain mapping.

[16]  Ruey S. Tsay Multivariate volatility models , 2007 .

[17]  Hernando Ombao,et al.  Evolutionary Coherence of Nonstationary Signals , 2008, IEEE Transactions on Signal Processing.

[18]  O. Lepskii On a Problem of Adaptive Estimation in Gaussian White Noise , 1991 .

[19]  Vesa Kiviniemi,et al.  A Sliding Time-Window ICA Reveals Spatial Variability of the Default Mode Network in Time , 2011, Brain Connect..

[20]  Min Chen,et al.  Multi-parametric neuroimaging reproducibility: A 3-T resource study , 2011, NeuroImage.

[21]  Martin A. Lindquist,et al.  Dynamic connectivity regression: Determining state-related changes in brain connectivity , 2012, NeuroImage.

[22]  Martin A. Lindquist,et al.  Modeling state-related fMRI activity using change-point theory , 2007, NeuroImage.

[23]  Matthew J. Lebo,et al.  Dynamic Conditional Correlations in Political Science , 2008 .

[24]  Eswar Damaraju,et al.  Tracking whole-brain connectivity dynamics in the resting state. , 2014, Cerebral cortex.

[25]  Kevin Sheppard Forecasting High Dimensional Covariance Matrices , 2012 .

[26]  David T. Jones,et al.  Non-Stationarity in the “Resting Brain’s” Modular Architecture , 2012, PloS one.

[27]  Thomas T. Liu,et al.  A component based noise correction method (CompCor) for BOLD and perfusion based fMRI , 2007, NeuroImage.

[28]  Xiao Liu,et al.  EEG correlates of time-varying BOLD functional connectivity , 2013, NeuroImage.

[29]  Daniel A. Handwerker,et al.  Periodic changes in fMRI connectivity , 2012, NeuroImage.

[30]  Enzo Tagliazucchi,et al.  Dynamic BOLD functional connectivity in humans and its electrophysiological correlates , 2012, Front. Hum. Neurosci..