Shear Viscosity Computed from the Finite-Size Effects of Self-Diffusivity in Equilibrium Molecular Dynamics
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S. H. Jamali | Jakob Söhl | Seyed Hossein Jamali | Remco Hartkamp | Thijs J H Vlugt | T. Vlugt | O. Moultos | Jakob Söhl | R. Hartkamp | Othonas A Moultos | Christos Bardas | C. Bardas
[1] Akihito Otani,et al. Reliable Viscosity Calculation from Equilibrium Molecular Dynamics Simulations: A Time Decomposition Method. , 2015, Journal of chemical theory and computation.
[2] J. García,et al. General friction theory viscosity model for the PC‐SAFT equation of state , 2006 .
[3] Wolfgang Nowak,et al. Bayesian Model Selection Helps To Choose Objectively between Thermodynamic Models: A Demonstration of Selecting a Viscosity Model Based on Entropy Scaling , 2016 .
[4] Edward J Maginn,et al. Direct Correlation between Ionic Liquid Transport Properties and Ion Pair Lifetimes: A Molecular Dynamics Study. , 2015, The journal of physical chemistry letters.
[5] Kurt Kremer,et al. Molecular dynamics simulation of a polymer chain in solution , 1993 .
[6] T. Vlugt,et al. Maxwell-Stefan diffusivities in binary mixtures of ionic liquids with dimethyl sulfoxide (DMSO) and H2O. , 2011, The journal of physical chemistry. B.
[7] Gaurav Pranami,et al. Estimating error in diffusion coefficients derived from molecular dynamics simulations. , 2015, Journal of chemical theory and computation.
[8] C. Brooks. Computer simulation of liquids , 1989 .
[9] Emma L. Smith,et al. Deep eutectic solvents (DESs) and their applications. , 2014, Chemical reviews.
[10] K Schulten,et al. VMD: visual molecular dynamics. , 1996, Journal of molecular graphics.
[11] K. Hermansson,et al. Effective three-body potentials for Li+(aq) and Mg2+(aq) , 2003 .
[12] A. Panagiotopoulos,et al. Molecular simulation of thermodynamic and transport properties for the H2O+NaCl system. , 2014, The Journal of chemical physics.
[13] Craig M. Tenney,et al. Limitations and recommendations for the calculation of shear viscosity using reverse nonequilibrium molecular dynamics. , 2010, The Journal of chemical physics.
[14] Ioannis G. Economou,et al. Thermodynamic and Transport Properties of H2O + NaCl from Polarizable Force Fields. , 2015, Journal of chemical theory and computation.
[15] Aage Fredenslund,et al. An improved corresponding states model for the prediction of oil and gas viscosities and thermal conductivities , 1987 .
[16] O. Borodin,et al. Viscosity of a room temperature ionic liquid: predictions from nonequilibrium and equilibrium molecular dynamics simulations. , 2009, Journal of Physical Chemistry B.
[17] K. Kobe. The properties of gases and liquids , 1959 .
[18] Y. Rosenfeld,et al. A quasi-universal scaling law for atomic transport in simple fluids , 1999 .
[19] B. Rotenberg,et al. Diffusion in bulk liquids: finite-size effects in anisotropic systems , 2015 .
[20] G. Hummer,et al. Divergent Diffusion Coefficients in Simulations of Fluids and Lipid Membranes. , 2016, The journal of physical chemistry. B.
[21] R. Zwanzig,et al. Time-Correlation Functions and Transport Coefficients in Statistical Mechanics , 1965 .
[22] M. Schoen,et al. The shear viscosity of a Lennard-Jones fluid calculated by equilibrium molecular dynamics , 1985 .
[23] Matthias Krack,et al. Static and Dynamical Properties of Liquid Water from First Principles by a Novel Car-Parrinello-like Approach. , 2009, Journal of chemical theory and computation.
[24] B. Rotenberg,et al. Diffusion coefficient and shear viscosity of rigid water models , 2012, Journal of physics. Condensed matter : an Institute of Physics journal.
[25] P. Tavan,et al. Polarizable six-point water models from computational and empirical optimization. , 2014, The journal of physical chemistry. B.
[26] G. Grest,et al. Viscosity calculations of n-alkanes by equilibrium molecular dynamics , 1997 .
[27] Stephan Kabelac,et al. Transport coefficients of the Lennard-Jones model fluid. I. Viscosity. , 2004, The Journal of chemical physics.
[28] Berk Hess,et al. GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers , 2015 .
[29] Edward J Maginn,et al. System-size corrections for self-diffusion coefficients calculated from molecular dynamics simulations: The case of CO2, n-alkanes, and poly(ethylene glycol) dimethyl ethers. , 2016, The Journal of chemical physics.
[30] B. Hess. Determining the shear viscosity of model liquids from molecular dynamics simulations , 2002 .
[31] E. Maginn,et al. Thermal and Transport Properties of Six Ionic Liquids: An Experimental and Molecular Dynamics Study , 2012 .
[32] André Bardow,et al. Finite-Size Effects of Binary Mutual Diffusion Coefficients from Molecular Dynamics , 2018, Journal of chemical theory and computation.
[33] D. Frenkel,et al. Finite-size corrections to the chemical potential , 1992 .
[34] Xiaojing Wang,et al. A review on the transport properties of ionic liquids , 2014 .
[35] C. Boned,et al. Molecular Dynamics Study of the Lennard-Jones Fluid Viscosity: Application to Real Fluids , 2005 .
[36] Randall Q. Snurr,et al. A new perspective on the order-n algorithm for computing correlation functions , 2009 .
[37] D. Bedeaux,et al. Fick diffusion coefficients of liquid mixtures directly obtained from equilibrium molecular dynamics. , 2011, The journal of physical chemistry. B.
[38] J. G. Powles,et al. Self-diffusion coefficient of the hard-sphere fluid: system size dependence and empirical correlations. , 2007, The journal of physical chemistry. B.
[39] T. Straatsma,et al. THE MISSING TERM IN EFFECTIVE PAIR POTENTIALS , 1987 .
[40] Josefa Fernández,et al. Scaling of the viscosity of the Lennard-Jones chain fluid model, argon, and some normal alkanes. , 2011, The Journal of chemical physics.
[41] Amyn S. Teja,et al. Generalized corresponding states method for the viscosities of liquid mixtures , 1981 .
[42] J. Abascal,et al. The shear viscosity of rigid water models. , 2010, The Journal of chemical physics.
[43] José Mario Martínez,et al. PACKMOL: A package for building initial configurations for molecular dynamics simulations , 2009, J. Comput. Chem..
[44] Athanassios Z Panagiotopoulos,et al. Atomistic Molecular Dynamics Simulations of Carbon Dioxide Diffusivity in n-Hexane, n-Decane, n-Hexadecane, Cyclohexane, and Squalane. , 2016, The journal of physical chemistry. B.
[45] Hui Zhang,et al. Corrections of the periodic boundary conditions with rectangular simulation boxes on the diffusion coefficient, general aspects , 2017 .
[46] Duncan Poole,et al. Routine Microsecond Molecular Dynamics Simulations with AMBER on GPUs. 2. Explicit Solvent Particle Mesh Ewald. , 2013, Journal of chemical theory and computation.
[47] Steve Plimpton,et al. Fast parallel algorithms for short-range molecular dynamics , 1993 .
[48] André Bardow,et al. Diffusion Coefficients from Molecular Dynamics Simulations in Binary and Ternary Mixtures , 2013 .
[49] E. Maginn,et al. Molecular Topology and Local Dynamics Govern the Viscosity of Imidazolium-Based Ionic Liquids. , 2015, The journal of physical chemistry. B.
[50] Hsueh-Chia Chang,et al. Efficient viscosity estimation from molecular dynamics simulation via momentum impulse relaxation , 2000 .
[51] F. Llovell,et al. Free-volume theory coupled with soft-SAFT for viscosity calculations: comparison with molecular simulation and experimental data. , 2013, The journal of physical chemistry. B.
[52] J. H. Dymond,et al. Hard-sphere theories of transport properties , 1985 .
[53] H. Shirota,et al. Dicationic versus monocationic ionic liquids: distinctive ionic dynamics and dynamical heterogeneity. , 2013, The journal of physical chemistry. B.
[54] K. Palanivelu,et al. Carbon Dioxide Capture and Utilization by Alkanolamines in Deep Eutectic Solvent Medium , 2015 .
[55] S. Passerini,et al. From Nanoscale to Microscale: Crossover in the Diffusion Dynamics within Two Pyrrolidinium-Based Ionic Liquids. , 2017, The journal of physical chemistry letters.
[56] E. Maginn,et al. Effect of temperature and water content on the shear viscosity of the ionic liquid 1-ethyl-3-methylimidazolium bis(trifluoromethanesulfonyl)imide as studied by atomistic simulations. , 2007, The journal of physical chemistry. B.
[57] B. Rotenberg,et al. Diffusion under Confinement: Hydrodynamic Finite-Size Effects in Simulation. , 2017, Journal of chemical theory and computation.
[58] Berend Smit,et al. Understanding molecular simulation: from algorithms to applications , 1996 .
[59] S. Aparicio,et al. Systematic Study on the Viscosity of Ionic Liquids: Measurement and Prediction , 2015 .
[60] Carlos Vega,et al. Simulating water with rigid non-polarizable models: a general perspective. , 2011, Physical chemistry chemical physics : PCCP.
[61] Sung Chul Bae,et al. When Brownian diffusion is not Gaussian. , 2012, Nature Materials.
[62] Thijs J. H. Vlugt,et al. State-of-the-Art of CO2 Capture with Ionic Liquids , 2012 .
[63] K. R. Harris. Scaling the transport properties of molecular and ionic liquids , 2016 .
[64] Florian Müller-Plathe,et al. The shear viscosity of molecular fluids: A calculation by reverse nonequilibrium molecular dynamics , 2002 .
[65] Berend Smit,et al. Are pressure fluctuation-based equilibrium methods really worse than nonequilibrium methods for calculating viscosities? , 2009, The Journal of chemical physics.
[66] Hans Hasse,et al. Prediction of self-diffusion coefficient and shear viscosity of water and its binary mixtures with methanol and ethanol by molecular simulation. , 2011, The Journal of chemical physics.
[67] Stephan Kabelac,et al. Transport coefficients of the Lennard-Jones model fluid. II Self-diffusion. , 2004, The Journal of chemical physics.
[68] Gerhard Hummer,et al. System-Size Dependence of Diffusion Coefficients and Viscosities from Molecular Dynamics Simulations with Periodic Boundary Conditions , 2004 .
[69] Rajamani Krishna,et al. The Darken Relation for Multicomponent Diffusion in Liquid Mixtures of Linear Alkanes: An Investigation Using Molecular Dynamics (MD) Simulations , 2005 .
[70] Sean Garrett-Roe,et al. Ultrafast Structure and Dynamics in Ionic Liquids: 2D-IR Spectroscopy Probes the Molecular Origin of Viscosity. , 2014, The journal of physical chemistry letters.
[71] Dick Bedeaux,et al. Kirkwood-Buff Integrals for Finite Volumes. , 2013, The journal of physical chemistry letters.
[72] F. Montel,et al. Influence of the mass ratio on viscosity in Lennard–Jones mixtures: The one-fluid model revisited using nonequilibrium molecular dynamics , 2005 .
[73] B. D. Todd,et al. Transient-time correlation function applied to mixed shear and elongational flows. , 2012, The Journal of chemical physics.
[74] J. E. Glynn,et al. Numerical Recipes: The Art of Scientific Computing , 1989 .
[75] Marcelle B. M. Spera,et al. Self-diffusion coefficient of bulk and confined water: a critical review of classical molecular simulation studies , 2018, Molecular Simulation.
[76] E. Maginn,et al. Rapid shear viscosity calculation by momentum impulse relaxation molecular dynamics. , 2005, The Journal of chemical physics.
[77] Howard J. M. Hanley,et al. Prediction of transport properties. 1. Viscosity of fluids and mixtures , 1981 .
[78] Jeffrey M. Young,et al. System-Size Dependence of Electrolyte Activity Coefficients in Molecular Simulations. , 2018, The journal of physical chemistry. B.