Dynamic functional connectivity analysis reveals transiently increased segregation in patients with severe stroke

Background and Purpose To explore the whole-brain dynamic functional network connectivity patterns in acute ischemic stroke (AIS) patients and their relation to stroke severity in the short and long term. Methods We investigated large-scale dynamic functional network connectivity of 41 AIS patients two to five days after symptom onset. Re-occurring dynamic connectivity configurations were obtained using a sliding window approach and k-means clustering. We evaluated differences in dynamic patterns between three NIHSS-stroke severity defined groups (mildly, moderately, and severely affected patients). Furthermore, we established correlation analyses between dynamic connectivity estimates and AIS severity as well as neurological recovery within the first 90 days after stroke. Finally, we built Bayesian hierarchical models to predict acute ischemic stroke severity and examine the inter-relation of dynamic connectivity and clinical measures, with an emphasis on white matter hyperintensity lesion load. Results We identified three distinct dynamic connectivity configurations in the early post-acute stroke phase. More severely affected patients (NIHSS 10-21) spent significantly more time in a highly segregated dynamic connectivity configuration that was characterized by particularly strong connectivity (three-level ANOVA: p<0.05, post hoc t-tests: p<0.05, FDR-corrected for multiple comparisons). Recovery, as indexed by the realized change of the NIHSS over time, was significantly linked to the acute dynamic connectivity between bilateral intraparietal lobule and left angular gyrus (Pearson's r=-0.68, p<0.05, FDR-corrected). Increasing dwell times, particularly those in a very segregated connectivity configuration, predicted higher acute stroke severity in our Bayesian modelling framework. Conclusions Our findings demonstrate transiently increased segregation between multiple functional domains in case of severe AIS. Dynamic connectivity involving default mode network components significantly correlated with recovery in the first three months post-stroke.

[1]  L. Hochberg,et al.  Corticospinal Tract Injury Estimated From Acute Stroke Imaging Predicts Upper Extremity Motor Recovery After Stroke. , 2019, Stroke.

[2]  R. Tibshirani,et al.  Sparse inverse covariance estimation with the graphical lasso. , 2008, Biostatistics.

[3]  Sylvain Houle,et al.  Abnormal intrinsic brain functional network dynamics in Parkinson’s disease , 2017, Brain : a journal of neurology.

[4]  X. Ding,et al.  Patterns in default-mode network connectivity for determining outcomes in cognitive function in acute stroke patients , 2014, Neuroscience.

[5]  Hao He,et al.  Artifact removal in the context of group ICA: A comparison of single‐subject and group approaches , 2016, Human brain mapping.

[6]  Zhiqiang Zhang,et al.  Dynamic Network Analysis Reveals Altered Temporal Variability in Brain Regions after Stroke: A Longitudinal Resting-State fMRI Study , 2018, Neural plasticity.

[7]  Kent A. Kiehl,et al.  A method for evaluating dynamic functional network connectivity and task-modulation: application to schizophrenia , 2010, Magnetic Resonance Materials in Physics, Biology and Medicine.

[8]  Jingyu Liu,et al.  Dynamic functional network connectivity in Huntington's disease and its associations with motor and cognitive measures , 2019, Human brain mapping.

[9]  O. Sporns,et al.  Rich-Club Organization of the Human Connectome , 2011, The Journal of Neuroscience.

[10]  Bixente Dilharreguy,et al.  Subacute default mode network dysfunction in the prediction of post-stroke depression severity. , 2012, Radiology.

[11]  Carl D. Hacker,et al.  Common Behavioral Clusters and Subcortical Anatomy in Stroke , 2015, Neuron.

[12]  A. Belger,et al.  Dynamic functional connectivity analysis reveals transient states of dysconnectivity in schizophrenia , 2014, NeuroImage: Clinical.

[13]  Arthur F. Kramer,et al.  Brain Network Modularity Predicts Exercise-Related Executive Function Gains in Older Adults , 2018, Front. Aging Neurosci..

[14]  D. Vidaurre,et al.  Behavioural relevance of spontaneous, transient brain network interactions in fMRI , 2019, NeuroImage.

[15]  Rachel L. Hawe,et al.  Bringing Proportional Recovery into Proportion: Bayesian Hierarchical Modelling of Post-Stroke Motor Performance , 2019 .

[16]  V. Calhoun,et al.  In search of multimodal brain alterations in Alzheimer's and Binswanger's disease , 2019, NeuroImage: Clinical.

[17]  R. C. Macridis A review , 1963 .

[18]  Luca Weis,et al.  Dynamic functional connectivity changes associated with dementia in Parkinson's disease. , 2019, Brain : a journal of neurology.

[19]  Jean-Baptiste Poline,et al.  Brain covariance selection: better individual functional connectivity models using population prior , 2010, NIPS.

[20]  Karl J. Friston,et al.  Unified segmentation , 2005, NeuroImage.

[21]  Andrew Gelman,et al.  Data Analysis Using Regression and Multilevel/Hierarchical Models , 2006 .

[22]  Ali-Mohammad Golestani,et al.  Longitudinal Evaluation of Resting-State fMRI After Acute Stroke With Hemiparesis , 2013, Neurorehabilitation and neural repair.

[23]  A. Alavi,et al.  MR signal abnormalities at 1.5 T in Alzheimer's dementia and normal aging. , 1987, AJR. American journal of roentgenology.

[24]  A. Villringer,et al.  Early Small Vessel Disease Affects Frontoparietal and Cerebellar Hubs in Close Correlation with Clinical Symptoms—A Resting-State fMRI Study , 2014, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

[25]  Mark D’Esposito,et al.  Brain Modularity: A Biomarker of Intervention-related Plasticity , 2019, Trends in Cognitive Sciences.

[26]  David A. Leopold,et al.  Dynamic functional connectivity: Promise, issues, and interpretations , 2013, NeuroImage.

[27]  Karl J. Friston Functional and Effective Connectivity: A Review , 2011, Brain Connect..

[28]  John Salvatier,et al.  Probabilistic programming in Python using PyMC3 , 2016, PeerJ Comput. Sci..

[29]  Alexander Leemans,et al.  Decoupling of structural and functional brain connectivity in older adults with white matter hyperintensities , 2015, NeuroImage.

[30]  G. Fink,et al.  Identifying Neuroimaging Markers of Motor Disability in Acute Stroke by Machine Learning Techniques. , 2015, Cerebral cortex.

[31]  Nick S. Ward,et al.  Restoring brain function after stroke — bridging the gap between animals and humans , 2017, Nature Reviews Neurology.

[32]  Nyaz Didehbani,et al.  Modular Brain Network Organization Predicts Response to Cognitive Training in Older Adults , 2016, PloS one.

[33]  S. Eickhoff,et al.  Approaches for the Integrated Analysis of Structure, Function and Connectivity of the Human Brain , 2011, Clinical EEG and neuroscience.

[34]  Zening Fu,et al.  Abnormal thalamocortical network dynamics in migraine , 2019, Neurology.

[35]  D. Rueckert,et al.  Brain Connectivity Measures Improve Modeling of Functional Outcome After Acute Ischemic Stroke. , 2019, Stroke.

[36]  Mark D'Esposito,et al.  Functional brain network modularity predicts response to cognitive training after brain injury , 2015, Neurology.

[37]  R W Cox,et al.  AFNI: software for analysis and visualization of functional magnetic resonance neuroimages. , 1996, Computers and biomedical research, an international journal.

[38]  G. Fink,et al.  Connectivity-based approaches in stroke and recovery of function , 2014, The Lancet Neurology.

[39]  W. Copen,et al.  White Matter Integrity and Early Outcomes After Acute Ischemic Stroke , 2019, Translational Stroke Research.

[40]  O. Sporns,et al.  Mapping the Structural Core of Human Cerebral Cortex , 2008, PLoS biology.

[41]  Eswar Damaraju,et al.  Tracking whole-brain connectivity dynamics in the resting state. , 2014, Cerebral cortex.

[42]  Vince D. Calhoun,et al.  Group ICA for identifying biomarkers in schizophrenia: ‘Adaptive’ networks via spatially constrained ICA show more sensitivity to group differences than spatio-temporal regression , 2018, NeuroImage: Clinical.

[43]  V. Calhoun,et al.  The Chronnectome: Time-Varying Connectivity Networks as the Next Frontier in fMRI Data Discovery , 2014, Neuron.

[44]  M. Corbetta,et al.  Resting interhemispheric functional magnetic resonance imaging connectivity predicts performance after stroke , 2009, Annals of neurology.

[45]  Emily S. Cross,et al.  Anodal tDCS over Primary Motor Cortex Provides No Advantage to Learning Motor Sequences via Observation , 2018, Neural plasticity.

[46]  Reinhold Schmidt,et al.  A comprehensive analysis of resting state fMRI measures to classify individual patients with Alzheimer's disease , 2018, NeuroImage.

[47]  Vince D. Calhoun,et al.  Transient increased thalamic-sensory connectivity and decreased whole-brain dynamism in autism , 2019, NeuroImage.

[48]  S. Lehéricy,et al.  Multivariate prediction of functional outcome using lesion topography characterized by acute diffusion tensor imaging , 2019, NeuroImage: Clinical.

[49]  Yuhui Du,et al.  Group information guided ICA for fMRI data analysis , 2013, NeuroImage.

[50]  Jingyu Liu,et al.  Whole-Brain Connectivity in a Large Study of Huntington's Disease Gene Mutation Carriers and Healthy Controls , 2018, Brain Connect..

[51]  Liang Wang,et al.  Dynamic functional reorganization of the motor execution network after stroke. , 2010, Brain : a journal of neurology.

[52]  Vince D Calhoun,et al.  Dynamic functional connectivity of neurocognitive networks in children , 2017, Human brain mapping.

[53]  David T. Jones,et al.  Non-Stationarity in the “Resting Brain’s” Modular Architecture , 2012, PloS one.

[54]  S. Ktena,et al.  Rich-Club Organization: An Important Determinant of Functional Outcome After Acute Ischemic Stroke , 2019, Frontiers in Neurology.

[55]  Walter Schneider,et al.  Identifying the brain's most globally connected regions , 2010, NeuroImage.

[56]  O. Wu,et al.  Recent Advances in Leukoaraiosis: White Matter Structural Integrity and Functional Outcomes after Acute Ischemic Stroke , 2016, Current Cardiology Reports.

[57]  V. Calhoun,et al.  Acute ischaemic stroke alters the brain’s preference for distinct dynamic connectivity states , 2020, Brain : a journal of neurology.

[58]  V. Calhoun,et al.  Dynamic connectivity states estimated from resting fMRI Identify differences among Schizophrenia, bipolar disorder, and healthy control subjects , 2014, Front. Hum. Neurosci..

[59]  Mark W. Woolrich,et al.  Network modelling methods for FMRI , 2011, NeuroImage.

[60]  Mark Rijpkema,et al.  Default Mode Network Connectivity in Stroke Patients , 2013, PloS one.

[61]  S. P. Lloyd,et al.  Least squares quantization in PCM , 1982, IEEE Trans. Inf. Theory.

[62]  Andrew S. Bock,et al.  Predicting future learning from baseline network architecture , 2016, NeuroImage.

[63]  Catie Chang,et al.  Time–frequency dynamics of resting-state brain connectivity measured with fMRI , 2010, NeuroImage.