Tracing the ancestry of modern bread wheats
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S. Dyer | F. V. van Eeuwijk | K. Mayer | J. Salse | D. Lang | B. Kilian | R. Waugh | M. Alaux | G. Haberer | M. Spannagl | B. Keller | D. Waite | L. Cattivelli | J. Russell | H. Özkan | N. Stein | G. Charmet | M. Seidel | Daniela Bustos-Korts | Thibault Leroy | A. Tondelli | J. Lage | C. Pont | F. Balfourier | T. Letellier | David Armisén | W. Duchemin | M. Molnár-Láng | Nadia Goué | Michael A. Seidel
[1] Hadi Quesneville,et al. Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data , 2018, Genome Biology.
[2] Paul H. C. Eilers,et al. Correcting for spatial heterogeneity in plant breeding experiments with P-splines , 2018 .
[3] H. Daetwyler,et al. Genetic Diversity, Population Structure and Ancestral Origin of Australian Wheat , 2017, Front. Plant Sci..
[4] John G Kenny,et al. Hidden variation in polyploid wheat drives local adaptation , 2017, bioRxiv.
[5] Dawei Huang,et al. Candidate loci involved in domestication and improvement detected by a published 90K wheat SNP array , 2017, Scientific Reports.
[6] A. Nadolska-Orczyk,et al. Major genes determining yield-related traits in wheat and barley , 2017, Theoretical and Applied Genetics.
[7] H. Quesneville,et al. Reconciling the evolutionary origin of bread wheat (Triticum aestivum). , 2017, The New phytologist.
[8] Joost J. B. Keurentjes,et al. Genetic architecture of plant stress resistance: multi‐trait genome‐wide association mapping , 2016, The New phytologist.
[9] M. Blum,et al. Pcadapt: An R Package to Perform Genome Scans for Selection Based on Principal Component Analysis , 2016, bioRxiv.
[10] Alain Charcosset,et al. Genome-Wide Analysis of Yield in Europe: Allelic Effects Vary with Drought and Heat Scenarios1[OPEN] , 2016, Plant Physiology.
[11] Gary D. Bader,et al. AutoAnnotate: A Cytoscape app for summarizing networks with semantic annotations , 2016, F1000Research.
[12] Tal Galili,et al. dendextend: an R package for visualizing, adjusting and comparing trees of hierarchical clustering , 2015, Bioinform..
[13] D. Hume,et al. Exome Sequencing: Current and Future Perspectives , 2015, G3: Genes, Genomes, Genetics.
[14] B. Kromer,et al. Tracing the genetic origin of Europe's first farmers reveals insights into their social organization , 2015, Proceedings of the Royal Society B: Biological Sciences.
[15] Neil Hall,et al. A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes , 2015, Genome Biology.
[16] R. Nielsen,et al. ANGSD: Analysis of Next Generation Sequencing Data , 2014, BMC Bioinformatics.
[17] A. von Haeseler,et al. IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies , 2014, Molecular biology and evolution.
[18] Roland Eils,et al. circlize implements and enhances circular visualization in R , 2014, Bioinform..
[19] Simon H. Martin,et al. Evaluating the Use of ABBA–BABA Statistics to Locate Introgressed Loci , 2014, bioRxiv.
[20] N. H. Nielsen,et al. Genetic Diversity and Population Structure Analysis of European Hexaploid Bread Wheat (Triticum aestivum L.) Varieties , 2014, PloS one.
[21] L. Excoffier,et al. Ignoring heterozygous sites biases phylogenomic estimates of divergence times: implications for the evolutionary history of microtus voles. , 2014, Molecular biology and evolution.
[22] E. Kuhn,et al. Recovering Power in Association Mapping Panels with Variable Levels of Linkage Disequilibrium , 2014, Genetics.
[23] T. A. Brown,et al. Reticulated Origin of Domesticated Emmer Wheat Supports a Dynamic Model for the Emergence of Agriculture in the Fertile Crescent , 2013, PloS one.
[24] J. Dvorak,et al. Aegilops tauschii single nucleotide polymorphisms shed light on the origins of wheat D-genome genetic diversity and pinpoint the geographic origin of hexaploid wheat. , 2013, The New phytologist.
[25] J. Anderson,et al. Genome-wide comparative diversity uncovers multiple targets of selection for improvement in hexaploid wheat landraces and cultivars , 2013, Proceedings of the National Academy of Sciences.
[26] Minh Anh Nguyen,et al. Ultrafast Approximation for Phylogenetic Bootstrap , 2013, Molecular biology and evolution.
[27] M. Feldman,et al. Genome Evolution Due to Allopolyploidization in Wheat , 2012, Genetics.
[28] Chris-Carolin Schön,et al. synbreed: a framework for the analysis of genomic prediction data using R , 2012, Bioinform..
[29] Liam J. Revell,et al. phytools: an R package for phylogenetic comparative biology (and other things) , 2012 .
[30] David Reich,et al. Testing for ancient admixture between closely related populations. , 2011, Molecular biology and evolution.
[31] Y. Matsuoka. Evolution of polyploid triticum wheats under cultivation: the role of domestication, natural hybridization and allopolyploid speciation in their diversification. , 2011, Plant & cell physiology.
[32] Hannes Feilhauer,et al. A brute-force approach to vegetation classification , 2010 .
[33] Robert Tibshirani,et al. A Framework for Feature Selection in Clustering , 2010, Journal of the American Statistical Association.
[34] William J. Astle,et al. Population Structure and Cryptic Relatedness in Genetic Association Studies , 2009, 1010.4681.
[35] J. Bocquet-Appel,et al. Detection of diffusion and contact zones of early farming in Europe from the space-time distribution of 14C dates , 2009 .
[36] Terence A Brown,et al. The complex origins of domesticated crops in the Fertile Crescent. , 2009, Trends in ecology & evolution.
[37] Sébastien Lê,et al. FactoMineR: An R Package for Multivariate Analysis , 2008 .
[38] F. V. van Eeuwijk,et al. A Mixed-Model Quantitative Trait Loci (QTL) Analysis for Multiple-Environment Trial Data Using Environmental Covariables for QTL-by-Environment Interactions, With an Example in Maize , 2007, Genetics.
[39] J. Dvorak,et al. The structure of wild and domesticated emmer wheat populations, gene flow between them, and the site of emmer domestication , 2007, Theoretical and Applied Genetics.
[40] D. Reich,et al. Population Structure and Eigenanalysis , 2006, PLoS genetics.
[41] K. Tanno,et al. How Fast Was Wild Wheat Domesticated? , 2006, Science.
[42] J. Li,et al. Adjusting multiple testing in multilocus analyses using the eigenvalues of a correlation matrix , 2005, Heredity.
[43] Robert Tibshirani,et al. Hybrid hierarchical clustering with applications to microarray data. , 2005, Biostatistics.
[44] Steven G. Schroeder,et al. The Effects of Artificial Selection on the Maize Genome , 2005, Science.
[45] S. Nasuda,et al. Durum wheat as a candidate for the unknown female progenitor of bread wheat: an empirical study with a highly fertile F1 hybrid with Aegilops tauschii Coss. , 2004, Theoretical and Applied Genetics.
[46] G. Kovács,et al. ORIGIN AND TAXONOMY OF WHEAT IN THE LIGHT OF RECENT RESEARCH , 2000 .
[47] K. Roeder,et al. Genomic Control for Association Studies , 1999, Biometrics.
[48] J. Dvorak,et al. Structural evolution of wheat chromosomes 4A, 5A, and 7B and its impact on recombination , 1995, Theoretical and Applied Genetics.
[49] R Core Team,et al. R: A language and environment for statistical computing. , 2014 .
[50] A. Korol,et al. Dissection of powdery mildew resistance uncover different resistance types in the Triticum turgidum L. gene pool , 2008 .
[51] Sue J. Welham,et al. Likelihood Ratio Tests for Fixed Model Terms using Residual Maximum Likelihood , 1997 .