Prioritization of Disease Susceptibility Genes Using LSM/SVD
暂无分享,去创建一个
Qin Yan | Xiao Sun | Lejun Gong | Ronggen Yang | Lejun Gong | R. Yang | Q. Yan | Xiao Sun
[1] Min Zhao,et al. AutismKB: an evidence-based knowledgebase of autism genetics , 2011, Nucleic Acids Res..
[2] Mario A. Cleves,et al. The Frequency of Polymorphisms affecting Lead and Mercury Toxicity among Children with Autism , 2008 .
[3] Hongfang Liu,et al. RedundancyMiner: De-replication of redundant GO categories in microarray and proteomics analysis , 2010, BMC Bioinformatics.
[4] Terrence S. Furey,et al. The UCSC Genome Browser Database , 2003, Nucleic Acids Res..
[5] Susan T. Dumais,et al. Using Linear Algebra for Intelligent Information Retrieval , 1995, SIAM Rev..
[6] Károly Mirnics,et al. Immune transcriptome alterations in the temporal cortex of subjects with autism , 2008, Neurobiology of Disease.
[7] Usha Naik,et al. Aberrations in folate metabolic pathway and altered susceptibility to autism , 2009, Psychiatric genetics.
[8] K. Mirnics,et al. Involvement of the PRKCB1 gene in autistic disorder: significant genetic association and reduced neocortical gene expression , 2009, Molecular Psychiatry.
[9] T. Landauer,et al. Indexing by Latent Semantic Analysis , 1990 .
[10] Yibo Wu,et al. GOSemSim: an R package for measuring semantic similarity among GO terms and gene products , 2010, Bioinform..
[11] M. Ehler,et al. Nonlinear gene cluster analysis with labeling for microarray gene expression data in organ development , 2011, BMC proceedings.
[12] J. Rubenstein,et al. Chromosome 8p as a potential hub for developmental neuropsychiatric disorders: implications for schizophrenia, autism and cancer , 2009, Molecular Psychiatry.
[13] May D. Wang,et al. GoMiner: a resource for biological interpretation of genomic and proteomic data , 2003, Genome Biology.
[14] Axel Benner,et al. FARP2, HDLBP and PASK are downregulated in a patient with autism and 2q37.3 deletion syndrome , 2009, American journal of medical genetics. Part A.
[15] Marie-Dominique Devignes,et al. Gene–disease relationship discovery based on model-driven data integration and database view definition , 2008, Bioinform..
[16] Xiao Sun,et al. Prediction of autism susceptibility genes based on association rules , 2012, Journal of neuroscience research.
[17] A. Doja,et al. Immunizations and Autism: A Review of the Literature , 2006, Canadian Journal of Neurological Sciences / Journal Canadien des Sciences Neurologiques.
[18] A. Philippi,et al. Haplotypes in the gene encoding protein kinase c-beta (PRKCB1) on chromosome 16 are associated with autism , 2005, Molecular Psychiatry.
[19] Thomas Bourgeron,et al. Mutations of the X-linked genes encoding neuroligins NLGN3 and NLGN4 are associated with autism , 2003, Nature Genetics.
[20] Lejun Gong,et al. AUTMINER: A SYSTEM FOR EXTRACTING ASD-RELATED GENES USING TEXT MINING , 2011 .
[21] J.R. Bellegarda,et al. Latent semantic mapping [information retrieval] , 2005, IEEE Signal Processing Magazine.
[22] P. Ashwood,et al. The role of immune dysfunction in the pathophysiology of autism , 2012, Brain, Behavior, and Immunity.
[23] Jing Chen,et al. Disease candidate gene identification and prioritization using protein interaction networks , 2009, BMC Bioinformatics.
[24] Mercedes Robledo,et al. Association studies in thyroid cancer susceptibility: are we on the right track? , 2011, Journal of molecular endocrinology.
[25] I S Kohane,et al. Comparative analysis of neurological disorders focuses genome-wide search for autism genes. , 2009, Genomics.
[26] Euan A. Adie. Speeding Disease Gene Discovery with SUSPECTS , 2005, BMC Bioinformatics.
[27] A. El-Ansary,et al. Novel metabolic biomarkers related to sulfur-dependent detoxification pathways in autistic patients of Saudi Arabia , 2011, BMC neurology.
[28] S. Rogers,et al. The Behavioral Phenotype in Fragile X: Symptoms of Autism in Very Young Children with Fragile X Syndrome, Idiopathic Autism, and Other Developmental Disorders , 2001, Journal of developmental and behavioral pediatrics : JDBP.
[29] Dragomir R. Radev,et al. Identifying gene-disease associations using centrality on a literature mined gene-interaction network , 2008, ISMB.
[30] Thomas Lengauer,et al. Improving disease gene prioritization using the semantic similarity of Gene Ontology terms , 2010, Bioinform..
[31] S. Faraone,et al. More evidence supports the association of PPP3CC with schizophrenia , 2007, Molecular Psychiatry.
[32] Bing Zhang,et al. WebGestalt: an integrated system for exploring gene sets in various biological contexts , 2005, Nucleic Acids Res..
[33] Murat Gunel,et al. Sequence Variants in SLITRK1 Are Associated with Tourette's Syndrome , 2005, Science.
[34] Miguel A. Andrade-Navarro,et al. Génie: literature-based gene prioritization at multi genomic scale , 2011, Nucleic Acids Res..
[35] L. Feuk,et al. Detection of large-scale variation in the human genome , 2004, Nature Genetics.
[36] Nathalie Boddaert,et al. Clinical, cellular, and neuropathological consequences of AP1S2 mutations: further delineation of a recognizable X‐linked mental retardation syndrome , 2008, Human mutation.
[37] Philip Resnik,et al. Semantic Similarity in a Taxonomy: An Information-Based Measure and its Application to Problems of Ambiguity in Natural Language , 1999, J. Artif. Intell. Res..
[38] Jan Freudenberg,et al. A similarity-based method for genome-wide prediction of disease-relevant human genes , 2002, ECCB.
[39] Susan T. Dumais,et al. The latent semantic analysis theory of knowledge , 1997 .
[40] C. Lord,et al. The Simons Simplex Collection: A Resource for Identification of Autism Genetic Risk Factors , 2010, Neuron.
[41] Michael W. Berry,et al. Document clustering using nonnegative matrix factorization , 2006, Inf. Process. Manag..
[42] M. Ashburner,et al. Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.
[43] David J. Porteous,et al. Speeding disease gene discovery by sequence based candidate prioritization , 2005, BMC Bioinformatics.
[44] Stepan Melnyk,et al. Metabolic endophenotype and related genotypes are associated with oxidative stress in children with autism , 2006, American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics.
[45] Wojciech Czaja,et al. Schroedinger Eigenmaps for the Analysis of Biomedical Data , 2011, IEEE Transactions on Pattern Analysis and Machine Intelligence.
[46] I L Cohen,et al. Why are autism and the fragile-X syndrome associated? Conceptual and methodological issues. , 1991, American journal of human genetics.
[47] Hisham Al-Mubaid,et al. A New Text Mining Approach for Finding Protein-to-Disease Associations , 2005 .
[48] Jerome Rene Bellegarda,et al. Latent Semantic Mapping , 2007 .