Ionization properties of titratable groups in ribonuclease T1
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Heinz Rüterjans | Andrey Karshikoff | H. Rüterjans | A. Karshikoff | A. Koumanov | N. Spitzner | Assen Koumanov | Normann Spitzner
[1] T. Ooi,et al. Titration of ribonuclease T1. , 1969, Biochemistry.
[2] Plamen A. Demirev,et al. MULTIPLY-PROTONATED PROTEIN IONS IN THE GAS PHASE: CALCULATION OF THE ELECTROSTATIC INTERACTIONS BETWEEN CHARGED SITES , 1997 .
[3] Thomas A. Halgren,et al. Merck molecular force field. II. MMFF94 van der Waals and electrostatic parameters for intermolecular. interactions , 1996, J. Comput. Chem..
[4] A. Warshel,et al. Macroscopic models for studies of electrostatic interactions in proteins: limitations and applicability. , 1984, Proceedings of the National Academy of Sciences of the United States of America.
[5] A. Karshikoff. A simple algorithm for the calculation of multiple site titration curves. , 1995, Protein engineering.
[6] Barry Honig,et al. Focusing of electric fields in the active site of Cu‐Zn superoxide dismutase: Effects of ionic strength and amino‐acid modification , 1986, Proteins.
[7] M. Karplus,et al. pKa's of ionizable groups in proteins: atomic detail from a continuum electrostatic model. , 1990, Biochemistry.
[8] A. Warshel. Electrostatic basis of structure-function correlation in proteins , 1981 .
[9] J. Warwicker,et al. Calculation of the electric potential in the active site cleft due to alpha-helix dipoles. , 1982, Journal of molecular biology.
[10] R. Berisio,et al. Protein titration in the crystal state. , 1999, Journal of molecular biology.
[11] C. Tanford,et al. Interpretation of protein titration curves. Application to lysozyme. , 1972, Biochemistry.
[12] D. Bashford,et al. Multiple‐site ligand binding to flexible macromolecules: Separation of global and local conformational change and an iterative mobile clustering approach , 1999 .
[13] H. Rüterjans,et al. Limits of NMR structure determination using variable target function calculations: ribonuclease T1, a case study. , 1997, Journal of molecular biology.
[14] D. Bashford,et al. Electrostatic calculations of the pKa values of ionizable groups in bacteriorhodopsin. , 1992, Journal of molecular biology.
[15] E. Mehler. Self-Consistent, Free Energy Based Approximation To Calculate pH Dependent Electrostatic Effects in Proteins , 1996 .
[16] C. Pace,et al. Contribution of histidine residues to the conformational stability of ribonuclease T1 and mutant Glu-58----Ala. , 1990, Biochemistry.
[17] K. Sharp,et al. On the calculation of pKas in proteins , 1993, Proteins.
[18] J. B. Matthew. Electrostatic effects in proteins. , 1985, Annual review of biophysics and biophysical chemistry.
[19] C. Pace,et al. Buried, charged, non-ion-paired aspartic acid 76 contributes favorably to the conformational stability of ribonuclease T1. , 1999, Biochemistry.
[20] B. Honig,et al. A rapid finite difference algorithm, utilizing successive over‐relaxation to solve the Poisson–Boltzmann equation , 1991 .
[21] H. Rüterjans,et al. Dynamics of β-CH and β-CH2 Groups of Amino Acid Side Chains in Proteins , 1998, Journal of biomolecular NMR.
[22] C. Tanford,et al. Theory of Protein Titration Curves. I. General Equations for Impenetrable Spheres , 1957 .
[23] E. Knapp,et al. Electrostatic models for computing protonation and redox equilibria in proteins , 1999, European Biophysics Journal.
[24] D. Sackett,et al. N5‐(L‐1‐carboxyethyl)‐L‐ornithine synthase: Physical and spectral characterization of the enzyme and its unusual low pKa fluorescent tyrosine residues , 1999, Protein science : a publication of the Protein Society.
[25] P. Beroza,et al. Application of a pairwise generalized Born model to proteins and nucleic acids: inclusion of salt effects , 1999 .
[26] A. Warshel,et al. Calculations of electrostatic interactions in biological systems and in solutions , 1984, Quarterly Reviews of Biophysics.
[27] F. Löhr,et al. Hydration water molecules of nucleotide-free RNase T1 studied by NMR spectroscopy in solution , 1998, Journal of biomolecular NMR.
[28] E. Alexov,et al. Calculated protein and proton motions coupled to electron transfer: electron transfer from QA- to QB in bacterial photosynthetic reaction centers. , 1999, Biochemistry.
[29] J. Kirkwood,et al. Theory of Solutions of Molecules Containing Widely Separated Charges with Special Application to Zwitterions , 1934 .
[30] N. Shimba,et al. The pH-dependent structural variation of complementarity-determining region H3 in the crystal structures of the Fv fragment from an anti-dansyl monoclonal antibody. , 1999, Journal of molecular biology.
[31] E. Alexov,et al. Incorporating protein conformational flexibility into the calculation of pH-dependent protein properties. , 1997, Biophysical journal.
[32] U. Heinemann,et al. Ribonuclease T1 with free recognition and catalytic site: crystal structure analysis at 1.5 A resolution. , 1991, Journal of molecular biology.
[33] R. Raines,et al. His ... Asp catalytic dyad of ribonuclease A: histidine pKa values in the wild-type, D121N, and D121A enzymes. , 1999, Biophysical journal.