Optimal protocols for minimal work processes in underdamped stochastic thermodynamics.
暂无分享,去创建一个
[1] Udo Seifert,et al. Efficiency at maximum power: An analytically solvable model for stochastic heat engines , 2007, 0710.4097.
[2] R. Zwanzig. High‐Temperature Equation of State by a Perturbation Method. I. Nonpolar Gases , 1954 .
[3] G. Torrie,et al. Nonphysical sampling distributions in Monte Carlo free-energy estimation: Umbrella sampling , 1977 .
[4] G. Crooks. Entropy production fluctuation theorem and the nonequilibrium work relation for free energy differences. , 1999, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics.
[5] Christoph Dellago,et al. On the efficiency of path sampling methods for the calculation of free energies from non-equilibrium simulations , 2007 .
[6] C. Dellago,et al. Biased sampling of nonequilibrium trajectories: can fast switching simulations outperform conventional free energy calculation methods? , 2005, The journal of physical chemistry. B.
[7] Bjarne Andresen,et al. Thermodynamics in finite time , 1984 .
[8] F. Curzon,et al. Efficiency of a Carnot engine at maximum power output , 1975 .
[9] U. Seifert,et al. Optimal finite-time processes in stochastic thermodynamics. , 2007, Physical review letters.
[10] C. Jarzynski. Equilibrium free-energy differences from nonequilibrium measurements: A master-equation approach , 1997, cond-mat/9707325.
[11] K. Schulten,et al. Calculating potentials of mean force from steered molecular dynamics simulations. , 2004, The Journal of chemical physics.
[12] Andreas Fischer,et al. Optimal Process Paths for Endoreversible Systems , 2003 .
[13] Peter Salamon,et al. Finite time thermodynamics: Optimal expansion of a heated working fluid , 1982 .
[14] Sean X. Sun,et al. Equilibrium free energy estimates based on nonequilibrium work relations and extended dynamics. , 2004, The Journal of chemical physics.
[15] G. Hummer,et al. Free energy reconstruction from nonequilibrium single-molecule pulling experiments , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[16] D. Zuckerman,et al. Single-ensemble nonequilibrium path-sampling estimates of free energy differences. , 2004, The Journal of chemical physics.
[17] T. Hatano,et al. Steady-state thermodynamics of Langevin systems. , 2000, Physical review letters.
[18] C. Jarzynski,et al. A “fast growth” method of computing free energy differences , 2001 .
[19] C. Dellago,et al. Equilibrium free energies from fast-switching trajectories with large time steps. , 2005, The Journal of chemical physics.
[20] C. Jarzynski,et al. Verification of the Crooks fluctuation theorem and recovery of RNA folding free energies , 2005, Nature.
[21] Martin Karplus,et al. Optimal estimates of free energies from multistate nonequilibrium work data. , 2006, Physical review letters.
[22] David D. L. Minh. Free-energy reconstruction from experiments performed under different biasing programs. , 2006, Physical review. E, Statistical, nonlinear, and soft matter physics.
[23] C. Jarzynski. Nonequilibrium Equality for Free Energy Differences , 1996, cond-mat/9610209.
[24] C. Jarzynski. Rare events and the convergence of exponentially averaged work values. , 2006, Physical review. E, Statistical, nonlinear, and soft matter physics.
[25] Michael R. Shirts,et al. Equilibrium free energies from nonequilibrium measurements using maximum-likelihood methods. , 2003, Physical review letters.
[26] Work fluctuation theorems for harmonic oscillators. , 2006, Physical review letters.
[27] G. Hummer. Fast-growth thermodynamic integration: Error and efficiency analysis , 2001 .
[28] Udo Seifert. Entropy production along a stochastic trajectory and an integral fluctuation theorem. , 2005, Physical review letters.
[29] I. Tinoco,et al. Equilibrium Information from Nonequilibrium Measurements in an Experimental Test of Jarzynski's Equality , 2002, Science.
[30] K. Schulten,et al. Single-Molecule Experiments in Vitro and in Silico , 2007, Science.
[31] M. D. Koning. Optimizing the driving function for nonequilibrium free-energy calculations in the linear regime: A variational approach , 2005 .
[32] F. Ritort,et al. Bias and error in estimates of equilibrium free-energy differences from nonequilibrium measurements , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[33] G. Crooks. Path-ensemble averages in systems driven far from equilibrium , 1999, cond-mat/9908420.
[34] E. Cohen,et al. Inertial Effects in Nonequilibrium Work Fluctuations by a Path Integral Approach , 2007, 0706.1199.
[35] D. Landau,et al. Efficient, multiple-range random walk algorithm to calculate the density of states. , 2000, Physical review letters.
[36] A. Engel,et al. Computing the optimal protocol for finite-time processes in stochastic thermodynamics. , 2007, Physical review. E, Statistical, nonlinear, and soft matter physics.
[37] R. Swendsen,et al. Comparison of free energy methods for molecular systems. , 2006, The Journal of chemical physics.