The lncRNA DEANR1 facilitates human endoderm differentiation by activating FOXA2 expression.
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Rui Liu | Yi Zhang | Wei Jiang | R. Liu | Wei Jiang | Yuting Liu | Kun Zhang | Yi Zhang | Yuting Liu | Kun Zhang
[1] David G. Knowles,et al. The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression , 2012, Genome research.
[2] E. Kroon,et al. Production of pancreatic hormone–expressing endocrine cells from human embryonic stem cells , 2006, Nature Biotechnology.
[3] Howard Y. Chang,et al. Control of somatic tissue differentiation by the long non-coding RNA TINCR , 2012, Nature.
[4] S. Salzberg,et al. The Transcriptional Landscape of the Mammalian Genome , 2005, Science.
[5] J. Flanagan,et al. APC Is an RNA-Binding Protein, and Its Interactome Provides a Link to Neural Development and Microtubule Assembly , 2014, Cell.
[6] Brad T. Sherman,et al. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources , 2008, Nature Protocols.
[7] Albert E. Almada,et al. Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells , 2013, Proceedings of the National Academy of Sciences.
[8] T. Derrien,et al. Long Noncoding RNAs with Enhancer-like Function in Human Cells , 2010, Cell.
[9] Sean Thomas,et al. A Temporal Chromatin Signature in Human Embryonic Stem Cells Identifies Regulators of Cardiac Development , 2012, Cell.
[10] R. Derynck,et al. SPECIFICITY AND VERSATILITY IN TGF-β SIGNALING THROUGH SMADS , 2005 .
[11] Wei Jiang,et al. Highly efficient differentiation of human ES cells and iPS cells into mature pancreatic insulin-producing cells , 2009, Cell Research.
[12] Tatiana A. Tatusova,et al. NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy , 2011, Nucleic Acids Res..
[13] J. Massagué,et al. Smad transcription factors. , 2005, Genes & development.
[14] Boris Lenhard,et al. Antisense Transcription in the Mammalian Transcriptome RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium , 2005 .
[15] G. Daley,et al. Stage-specific signaling through TGF b family members and WNT regulates patterning and pancreatic specification of human pluripotent stem cells , 2022 .
[16] M. Grompe,et al. Isolation of major pancreatic cell types and long-term culture-initiating cells using novel human surface markers. , 2008, Stem cell research.
[17] Hao Zhang,et al. Potentiation of Smad-mediated transcriptional activation by the RNA-binding protein RBPMS , 2006, Nucleic acids research.
[18] Michael Q. Zhang,et al. Epigenomic Analysis of Multilineage Differentiation of Human Embryonic Stem Cells , 2013, Cell.
[19] H. Deng,et al. In vitro derivation of functional insulin-producing cells from human embryonic stem cells , 2007, Cell Research.
[20] Michael Morse,et al. Multiple knockout mouse models reveal lincRNAs are required for life and brain development , 2013, eLife.
[21] Prabhakar R. Gudla,et al. Allele-specific nuclear positioning of the monoallelically expressed astrocyte marker GFAP. , 2008, Genes & development.
[22] J. Schug,et al. Epigenomic plasticity enables human pancreatic α to β cell reprogramming. , 2013, The Journal of clinical investigation.
[23] M. Weiss,et al. Self-renewing endodermal progenitor lines generated from human pluripotent stem cells. , 2012, Cell stem cell.
[24] S. Batalov,et al. Antisense Transcription in the Mammalian Transcriptome , 2005, Science.
[25] Nadav S. Bar,et al. Landscape of transcription in human cells , 2012, Nature.
[26] Bronwen L. Aken,et al. GENCODE: The reference human genome annotation for The ENCODE Project , 2012, Genome research.
[27] Edward Chuong,et al. Chromatin and transcriptional signatures for Nodal signaling during endoderm formation in hESCs. , 2011, Developmental biology.
[28] J. Schug,et al. Transcriptomes of the major human pancreatic cell types , 2011, Diabetologia.
[29] James D. Johnson,et al. Reversal of diabetes with insulin-producing cells derived in vitro from human pluripotent stem cells , 2014, Nature Biotechnology.
[30] David R. Kelley,et al. Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks , 2012, Nature Protocols.
[31] Manolis Kellis,et al. The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse. , 2013, Developmental cell.
[32] M. Trotter,et al. Pluripotency factors regulate definitive endoderm specification through eomesodermin. , 2011, Genes & development.
[33] Vincent L. Butty,et al. Braveheart, a Long Noncoding RNA Required for Cardiovascular Lineage Commitment , 2013, Cell.
[34] Xuetao Cao,et al. The STAT3-Binding Long Noncoding RNA lnc-DC Controls Human Dendritic Cell Differentiation , 2014, Science.
[35] Jeannie T. Lee,et al. Detection of nascent RNA, single-copy DNA and protein localization by immunoFISH in mouse germ cells and preimplantation embryos , 2011, Nature Protocols.
[36] Howard Y. Chang,et al. Molecular mechanisms of long noncoding RNAs. , 2011, Molecular cell.
[37] A. Zorn,et al. Sox17 and beta-catenin cooperate to regulate the transcription of endodermal genes. , 2004, Development.
[38] Cole Trapnell,et al. Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses. , 2011, Genes & development.
[39] Howard Y. Chang,et al. Genome regulation by long noncoding RNAs. , 2012, Annual review of biochemistry.
[40] D. Melton,et al. Generation of Functional Human Pancreatic β Cells In Vitro , 2014, Cell.
[41] E. Kroon,et al. Pancreatic endoderm derived from human embryonic stem cells generates glucose-responsive insulin-secreting cells in vivo , 2008, Nature Biotechnology.
[42] Pei-Rong Wang,et al. Deconstructing pancreas development to reconstruct human islets from pluripotent stem cells. , 2010, Cell stem cell.
[43] Guoping Fan,et al. Pancreatic β cell identity is maintained by DNA methylation-mediated repression of Arx. , 2011, Developmental cell.
[44] D. Bartel,et al. lincRNAs: Genomics, Evolution, and Mechanisms , 2013, Cell.
[45] Jonathan Schug,et al. Dynamic chromatin remodeling mediated by polycomb proteins orchestrates pancreatic differentiation of human embryonic stem cells. , 2013, Cell stem cell.
[46] M. McCarthy,et al. Human β cell transcriptome analysis uncovers lncRNAs that are tissue-specific, dynamically regulated, and abnormally expressed in type 2 diabetes. , 2012, Cell metabolism.
[47] H. Lodish,et al. Regulation of mammalian cell differentiation by long non‐coding RNAs , 2012, EMBO reports.
[48] N. Bursac,et al. WNT3 Is a Biomarker Capable of Predicting the Definitive Endoderm Differentiation Potential of hESCs , 2013, Stem cell reports.
[49] A. Zorn,et al. Sox17 and β-catenin cooperate to regulate the transcription of endodermal genes , 2004 .
[50] R. Derynck,et al. Specificity and versatility in tgf-beta signaling through Smads. , 2005, Annual review of cell and developmental biology.
[51] M. Gerstein,et al. Dynamic transcriptomes during neural differentiation of human embryonic stem cells revealed by short, long, and paired-end sequencing , 2010, Proceedings of the National Academy of Sciences.
[52] Wei Jiang,et al. Histone H3K27me3 demethylases KDM6A and KDM6B modulate definitive endoderm differentiation from human ESCs by regulating WNT signaling pathway , 2012, Cell Research.
[53] H. Deng,et al. CD24: A Novel Surface Marker for PDX1‐Positive Pancreatic Progenitors Derived from Human Embryonic Stem Cells , 2011, Stem cells.
[54] Rui Liu,et al. Tet1 controls meiosis by regulating meiotic gene expression , 2012, Nature.
[55] Aaron M Zorn,et al. Vertebrate endoderm development and organ formation. , 2009, Annual review of cell and developmental biology.