Computational prediction of protein interactions related to the invasion of erythrocytes by malarial parasites
暂无分享,去创建一个
Jun Wang | Shuai Zhang | Yan Shen | Yinghui Li | Zhikai Xu | Xuewu Liu | Jiao Liang | Yuxiao Huang | Ya Zhao | Zhikai Xu | Ya Zhao | Yuxiao Huang | Xuewu Liu | Jiao Liang | Jun Wang | Yan Shen | Yinghui Li | Shuai Zhang
[1] Gavin J. Wright,et al. Avidity-based Extracellular Interaction Screening (AVEXIS) for the Scalable Detection of Low-affinity Extracellular Receptor-Ligand Interactions , 2012, Journal of visualized experiments : JoVE.
[2] Nianjun Liu,et al. Inferring protein-protein interactions through high-throughput interaction data from diverse organisms , 2005, Bioinform..
[3] Dominic P. Kwiatkowski,et al. BASIGIN is a receptor essential for erythrocyte invasion by Plasmodium falciparum , 2011, Nature.
[4] D Koutsouris,et al. Classification algorithms for microcalcifications in mammograms (Review). , 2006, Oncology reports.
[5] M. O’Banion,et al. Interleukin-1β mediated amyloid plaque clearance is independent of CCR2 signaling in the APP/PS1 mouse model of Alzheimer's disease , 2014, Neurobiology of Disease.
[6] Ariel Linden. Measuring diagnostic and predictive accuracy in disease management: an introduction to receiver operating characteristic (ROC) analysis. , 2006, Journal of evaluation in clinical practice.
[7] Jingchu Luo,et al. Secreted protein prediction system combining CJ-SPHMM, TMHMM, and PSORT , 2003, Mammalian Genome.
[8] Jianqing Fan,et al. A Computational Approach to the Functional Clustering of Periodic Gene-Expression Profiles , 2008, Genetics.
[9] Pushkar Sharma,et al. Key molecular events during host cell invasion by Apicomplexan pathogens. , 2013, Current opinion in microbiology.
[10] C. Chitnis,et al. Distinct External Signals Trigger Sequential Release of Apical Organelles during Erythrocyte Invasion by Malaria Parasites , 2010, PLoS pathogens.
[11] Juraj Kabat,et al. Glycophorin B is the erythrocyte receptor of Plasmodium falciparum erythrocyte-binding ligand, EBL-1 , 2009, Proceedings of the National Academy of Sciences.
[12] I A Cestari,et al. Critical analysis of autoregressive and fast Fourier transform markers of cardiovascular variability in rats and humans. , 2009, Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologicas.
[13] Bhanu P Jena. Role of SNAREs in membrane fusion. , 2011, Advances in experimental medicine and biology.
[14] Steven Johnson,et al. Semaphorin-7A Is an Erythrocyte Receptor for P. falciparum Merozoite-Specific TRAP Homolog, MTRAP , 2012, PLoS pathogens.
[15] J. Rayner,et al. Towards a comprehensive Plasmodium falciparum merozoite cell surface and secreted recombinant protein library , 2014, Malaria Journal.
[16] Priyabrata Pattnaik,et al. Structural analogs of sialic acid interfere with the binding of erythrocyte binding antigen-175 to glycophorin A, an interaction crucial for erythrocyte invasion by Plasmodium falciparum. , 2004, Molecular and biochemical parasitology.
[17] Life Technologies,et al. A map of human genome variation from population-scale sequencing , 2011 .
[18] Brad T. Sherman,et al. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources , 2008, Nature Protocols.
[19] S. Brunak,et al. SignalP 4.0: discriminating signal peptides from transmembrane regions , 2011, Nature Methods.
[20] Anton Simeonov,et al. Disrupting malaria parasite AMA1 – RON2 interaction with a small molecule prevents erythrocyte invasion , 2013, Nature Communications.
[21] D. Altshuler,et al. A map of human genome variation from population-scale sequencing , 2010, Nature.
[22] J. Rayner,et al. RH5–Basigin interaction plays a major role in the host tropism of Plasmodium falciparum , 2013, Proceedings of the National Academy of Sciences.
[23] Steven S. Oh,et al. Band 3 is a host receptor binding merozoite surface protein 1 during the Plasmodium falciparum invasion of erythrocytes , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[24] Christian J Stoeckert,et al. Computational modeling of the Plasmodium falciparum interactome reveals protein function on a genome-wide scale. , 2006, Genome research.
[25] M. Mann,et al. In-depth analysis of the membrane and cytosolic proteome of red blood cells. , 2006, Blood.
[26] Haseong Kim,et al. A method to identify differential expression profiles of time-course gene data with Fourier transformation , 2013, BMC Bioinformatics.
[27] David L. Tabb,et al. A proteomic view of the Plasmodium falciparum life cycle , 2002, Nature.
[28] Jonathan E. Allen,et al. Genome sequence of the human malaria parasite Plasmodium falciparum , 2002, Nature.
[29] Hui Zheng,et al. Physiological functions of APP family proteins. , 2012, Cold Spring Harbor perspectives in medicine.
[30] E. Birney,et al. Pfam: the protein families database , 2013, Nucleic Acids Res..
[31] Alexander G. Maier,et al. Binding but Not Receptor Specificity in Antigens 140 and 181 Affect Function and Polymorphisms in Erythrocyte Binding Supplemental Material , 2009 .
[32] Trey Ideker,et al. Cytoscape 2.8: new features for data integration and network visualization , 2010, Bioinform..
[33] Babacar Faye,et al. Immunogenicity of ChAd63 + MVA ME-TRAP in Senegalese adults , 2014, Malaria Journal.
[34] E. Jaśkiewicz,et al. [Human erythrocyte glycophorin C as the receptor for EBA-140 Plasmodium falciparum merozoite ligand]. , 2013, Postepy higieny i medycyny doswiadczalnej.
[35] Matthew Bogyo,et al. A Role for the Protease Falcipain 1 in Host Cell Invasion by the Human Malaria Parasite , 2002, Science.
[36] M. Vignali,et al. A protein interaction network of the malaria parasite Plasmodium falciparum , 2005, Nature.
[37] B. Snel,et al. Comparative assessment of large-scale data sets of protein–protein interactions , 2002, Nature.
[38] Christie S. Chang,et al. The BioGRID interaction database: 2013 update , 2012, Nucleic Acids Res..
[39] Zhiqiang Chang,et al. Prediction of human protein–protein interaction by a mixed Bayesian model and its application to exploring underlying cancer-related pathway crosstalk , 2011, Journal of The Royal Society Interface.
[40] Dave Richard,et al. Complement receptor 1 is the host erythrocyte receptor for Plasmodium falciparum PfRh4 invasion ligand , 2010, Proceedings of the National Academy of Sciences.
[41] Julian C. Rayner,et al. A Library of Functional Recombinant Cell-surface and Secreted P. falciparum Merozoite Proteins* , 2013, Molecular & Cellular Proteomics.
[42] Sudhir Sahasrabudhe,et al. Interaction of an atypical Plasmodium falciparum ETRAMP with human apolipoproteins , 2008, Malaria Journal.
[43] Robert D. Finn,et al. iPfam: a database of protein family and domain interactions found in the Protein Data Bank , 2013, Nucleic Acids Res..
[44] S. Wuchty. Computational Prediction of Host-Parasite Protein Interactions between P. falciparum and H. sapiens , 2011, PloS one.
[45] J. Derisi,et al. The Transcriptome of the Intraerythrocytic Developmental Cycle of Plasmodium falciparum , 2003, PLoS biology.
[46] Marco Masseroli,et al. Performance of combinatorial peptide libraries in capturing the low-abundance proteome of red blood cells. 2. Behavior of resins containing individual amino acids. , 2008, Analytical chemistry.
[47] Inyoung Kim,et al. Bayesian Methods for Predicting Interacting Protein Pairs Using Domain Information , 2007, Biometrics.
[48] Arnaud Céol,et al. 3did: a catalog of domain-based interactions of known three-dimensional structure , 2013, Nucleic Acids Res..
[49] Ting Chen,et al. An integrated approach to the prediction of domain-domain interactions , 2006, BMC Bioinformatics.
[50] Lydia Danglot,et al. Multiple roles of the vesicular‐SNARE TI‐VAMP in post‐Golgi and endosomal trafficking , 2009, FEBS letters.