MCMC in the Analysis of Genetic Data on Related Individuals
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[1] E. A. Thompson,et al. MULTIPOINT LINKAGE ANALYSES FOR DISEASE MAPPING IN EXTENDED PEDIGREES: A MARKOV CHAIN MONTE CARLO APPROACH , 2007 .
[2] Hosung Kang,et al. Highly Structured Models for Spectral Analysis in High-Energy Astrophysics , 2004 .
[3] J. B. S. Haldane,et al. The probable errors of calculated linkage values, and the most accurate method of determining gametic from certain zygotic series , 1919, Journal of Genetics.
[4] W. Gilks,et al. Adaptive Rejection Metropolis Sampling Within Gibbs Sampling , 1995 .
[5] J. Rosenthal,et al. Geometric Ergodicity and Hybrid Markov Chains , 1997 .
[6] E. Lander,et al. Construction of multilocus genetic linkage maps in humans. , 1987, Proceedings of the National Academy of Sciences of the United States of America.
[7] N. Sheehan. On the Application of Markov Chain Monte Carlo Methods to Genetic Analyses on Complex Pedigrees , 2000 .
[8] David J. Spiegelhalter,et al. Local computations with probabilities on graphical structures and their application to expert systems , 1990 .
[9] L. Tierney. Markov Chains for Exploring Posterior Distributions , 1994 .
[10] K Lange,et al. A random walk method for computing genetic location scores. , 1991, American journal of human genetics.
[11] Glen D Meeden,et al. Fuzzy and randomized confidence intervals and P-values , 2005 .
[12] V. Kashyap,et al. Markov-Chain Monte Carlo Reconstruction of Emission Measure Distributions: Application to Solar Extreme-Ultraviolet Spectra , 1998 .
[13] S. Lauritzen. Propagation of Probabilities, Means, and Variances in Mixed Graphical Association Models , 1992 .
[14] D. V. van Dyk,et al. Partially Collapsed Gibbs Samplers , 2008 .
[15] Y. Amit. On rates of convergence of stochastic relaxation for Gaussian and non-Gaussian distributions , 1991 .
[16] Xiao-Li Meng,et al. The EM Algorithm—an Old Folk‐song Sung to a Fast New Tune , 1997 .
[17] Gareth O. Roberts,et al. Examples of Adaptive MCMC , 2009 .
[18] J. Rosenthal,et al. Optimal scaling for various Metropolis-Hastings algorithms , 2001 .
[19] E. Thompson,et al. Multilocus Lod Scores in Large Pedigrees: Combination of Exact and Approximate Calculations , 2007, Human Heredity.
[20] D. Rubin,et al. The ECME algorithm: A simple extension of EM and ECM with faster monotone convergence , 1994 .
[21] Elizabeth A. Thompson,et al. MCMC Estimation of Multi‐locus Genome Sharing and Multipoint Gene Location Scores , 2000 .
[22] D. V. van Dyk,et al. Searching for Narrow Emission Lines in X-ray Spectra: Computation and Methods , 2008, 0808.3164.
[23] B. Browning,et al. Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering. , 2007, American journal of human genetics.
[24] Alun Thomas,et al. Multilocus linkage analysis by blocked Gibbs sampling , 2000, Stat. Comput..
[25] D. V. van Dyk,et al. Partially Collapsed Gibbs Samplers: Illustrations and Applications , 2009 .
[26] Jun S. Liu,et al. Covariance structure of the Gibbs sampler with applications to the comparisons of estimators and augmentation schemes , 1994 .
[27] D. V. Dyk,et al. An Image Restoration Technique with Error Estimates , 2004 .
[28] E A Thompson,et al. Evaluation of likelihood ratios for complex genetic models. , 1991, IMA journal of mathematics applied in medicine and biology.
[29] K Lange,et al. Descent graphs in pedigree analysis: applications to haplotyping, location scores, and marker-sharing statistics. , 1996, American journal of human genetics.
[30] Adrian F. M. Smith,et al. Sampling-Based Approaches to Calculating Marginal Densities , 1990 .
[31] Xiao-Li Meng,et al. Seeking efficient data augmentation schemes via conditional and marginal augmentation , 1999 .
[32] Xiao-Li Meng,et al. A Note on Bivariate Distributions That are Conditionally Normal , 1991 .
[33] S. Heath. Markov chain Monte Carlo segregation and linkage analysis for oligogenic models. , 1997, American journal of human genetics.
[34] S. DeGennaro,et al. INVERTING COLOR–MAGNITUDE DIAGRAMS TO ACCESS PRECISE STAR CLUSTER PARAMETERS: A NEW WHITE DWARF AGE FOR THE HYADES , 2009 .
[35] L. Baum,et al. A Maximization Technique Occurring in the Statistical Analysis of Probabilistic Functions of Markov Chains , 1970 .
[36] Analysis of energy spectra with low photon counts via Bayesian posterior simulation , 2001, astro-ph/0008170.
[37] G. Roberts,et al. Updating Schemes, Correlation Structure, Blocking and Parameterization for the Gibbs Sampler , 1997 .
[38] Andrew George,et al. Discovering Disease Genes: Multipoint Linkage Analysis via a New Markov Chain Monte Carlo Approach , 2003 .
[39] L. Tierney. A note on Metropolis-Hastings kernels for general state spaces , 1998 .
[40] Xiao-Li Meng,et al. The Art of Data Augmentation , 2001 .
[41] A. Whittemore,et al. A class of tests for linkage using affected pedigree members. , 1994, Biometrics.
[42] Elizabeth A. Thompson,et al. Conditional Tests for Localizing Trait Genes , 2009, Human Heredity.
[43] R. Elston,et al. A general model for the genetic analysis of pedigree data. , 1971, Human heredity.
[44] L Kruglyak,et al. Parametric and nonparametric linkage analysis: a unified multipoint approach. , 1996, American journal of human genetics.
[45] Elizabeth A. Thompson,et al. MCMC IN THE ANALYSIS OF GENETIC DATA ON PEDIGREES , 2004 .
[46] E A Thompson,et al. Monte Carlo estimation of mixed models for large complex pedigrees. , 1994, Biometrics.
[47] Dan Geiger,et al. Optimizing Exact Genetic Linkage Computations , 2004, J. Comput. Biol..
[48] D. V. Dyk,et al. Statistical analysis of stellar evolution , 2009, 0905.2547.
[49] D. Gudbjartsson,et al. A high-resolution recombination map of the human genome , 2002, Nature Genetics.
[50] M. Boehnke,et al. Estimating the power of a proposed linkage study for a complex genetic trait. , 1989, American journal of human genetics.
[51] Mark H. Skolnick,et al. Pedigree Analysis of Complex Models , 1980 .
[52] F. Kong,et al. A stochastic approximation algorithm with Markov chain Monte-carlo method for incomplete data estimation problems. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[53] Charles J. Geyer,et al. Fuzzy p-values in latent variable problems , 2007 .
[54] L. Baum,et al. An inequality and associated maximization technique in statistical estimation of probabilistic functions of a Markov process , 1972 .
[55] J. Besag,et al. Spatial Statistics and Bayesian Computation , 1993 .
[56] Cedric A. B. Smith,et al. The Detection of Linkage in Human Genetics , 1953 .
[57] Ward Whitt,et al. Estimating the asymptotic variance with batch means , 1991, Oper. Res. Lett..
[58] E. Thompson,et al. Estimation of conditional multilocus gene identity among relatives , 1999 .
[59] A. Gelfand,et al. Efficient parametrisations for normal linear mixed models , 1995 .
[60] M S McPeek,et al. Optimal allele‐sharing statistics for genetic mapping using affected relatives , 1999, Genetic epidemiology.
[61] P. Gregory. A Bayesian Analysis of Extrasolar Planet Data for HD 73526 , 2005 .
[62] H. Robbins. A Stochastic Approximation Method , 1951 .
[63] William C L Stewart,et al. Improving Estimates of Genetic Maps: A Maximum Likelihood Approach , 2006, Biometrics.