A multivariate process monitoring strategy and control concept for a small-scale fermenter in a PAT environment

This work describes a multivariate monitoring and control concept for bioprocesses based on historical process data. The concept is demonstrated for a Saccharomyces Cerevisiae (baker’s yeast) fermentation process executed in a small-scale bioreactor, which is equipped with common probes to analyze the broth and off-gases. The data of “in-control” fermentation processes were evaluated by means of a principal component analysis to define confidence limits for subsequent fermentations. A violation of these limits indicated that a process had to be classified as “out-of-control”. Fault diagnosis was provided by the components of the squared prediction error, which can also be used to determine the appropriate counteractions, e.g. via an expert system control strategy as described in this study. The sensitivity of fault diagnosis was demonstrated via various erroneous runs. The duration of bioprocesses can vary distinctly, which complicates the definition of time dependent control limits. Therefore, this study utilizes a three-component partial least squares regression model to quantify the current batch maturity during the process. This maturity is then used to reference current data to the appropriate historical data and the assigned control limits.

[1]  W. A. Shewhart,et al.  Statistical method from the viewpoint of quality control , 1939 .

[2]  J Glassey,et al.  Issues in the development of an industrial bioprocess advisory system. , 2000, Trends in biotechnology.

[3]  J. Lopes,et al.  A PAT approach for the on-line monitoring of pharmaceutical co-crystals formation with near infrared spectroscopy. , 2014, International journal of pharmaceutics.

[4]  Calyampudi R. Rao,et al.  Quality Control and Reliability (Handbook of Statistics, Vol. 7) , 1990 .

[5]  A. de Juan,et al.  Blending process modeling and control by multivariate curve resolution. , 2013, Talanta.

[6]  J. Puhakka,et al.  Effect of changing temperature on anaerobic hydrogen production and microbial community composition in an open-mixed culture bioreactor , 2010 .

[7]  Kai Loegering,et al.  Sequential/parallel production of potential Malaria vaccines--A direct way from single batch to quasi-continuous integrated production. , 2015, Journal of biotechnology.

[8]  Peter Filzmoser,et al.  Introduction to Multivariate Statistical Analysis in Chemometrics , 2009 .

[9]  Thomas P. Ryan,et al.  Statistical methods for quality improvement , 1989 .

[10]  Frank B. Alt,et al.  17 Multivariate process control , 1988 .

[11]  Kim H. Esbensen,et al.  On‐line batch fermentation process monitoring (NIR)—introducing ‘biological process time’ , 2004 .

[12]  Thomas E. Marlin,et al.  Multivariate statistical monitoring of process operating performance , 1991 .

[13]  Anurag S. Rathore,et al.  QbD/PAT for bioprocessing: moving from theory to implementation , 2014 .

[14]  John F. MacGregor,et al.  Multivariate SPC charts for monitoring batch processes , 1995 .

[15]  John F. MacGregor,et al.  Multi-way partial least squares in monitoring batch processes , 1995 .

[16]  Theodora Kourti,et al.  Analysis, monitoring and fault diagnosis of batch processes using multiblock and multiway PLS , 1995 .

[17]  A. Smilde,et al.  Multiblock PLS analysis of an industrial pharmaceutical process , 2002, Biotechnology and bioengineering.

[18]  Uffe Jørgensen,et al.  Prediction of biogas yield and its kinetics in reed canary grass using near infrared reflectance spectroscopy and chemometrics. , 2013, Bioresource technology.

[19]  Thomas P. Ryan,et al.  Statistical Methods for Quality Improvement: Ryan/Quality Improvement 3E , 2011 .

[20]  Alberto Ferrer,et al.  Real-time synchronization of batch trajectories for on-line multivariate statistical process control using Dynamic Time Warping , 2011 .

[21]  Simon X. Yang,et al.  A Multi-Fault Diagnosis Method for Sensor Systems Based on Principle Component Analysis , 2009, Sensors.

[22]  J. C. Menezes Process Analytical Technology in Bioprocess Development and Manufacturing , 2011 .

[23]  Theodora Kourti,et al.  Process Analytical Technology Beyond Real-Time Analyzers: The Role of Multivariate Analysis , 2006 .

[24]  Joaquim M. S. Cabral,et al.  Real-time bioprocess monitoring: Part I: In situ sensors , 2006 .

[25]  S Albert,et al.  Multivariate statistical monitoring of batch processes: an industrial case study of fermentation supervision. , 2001, Trends in biotechnology.

[26]  Staffan Folestad,et al.  Real-time alignment of batch process data using COW for on-line process monitoring , 2006 .

[27]  Svante Wold,et al.  Modelling and diagnostics of batch processes and analogous kinetic experiments , 1998 .

[28]  Theodora Kourti,et al.  Statistical Process Control of Multivariate Processes , 1994 .

[29]  Carl-Fredrik Mandenius,et al.  Integration of distributed multi-analyzer monitoring and control in bioprocessing based on a real-time expert system. , 2003, Journal of biotechnology.

[30]  Peter A Vanrolleghem,et al.  Monitoring of a sequencing batch reactor using adaptive multiblock principal component analysis. , 2003, Biotechnology and bioengineering.

[31]  S. Wold,et al.  PLS-regression: a basic tool of chemometrics , 2001 .

[32]  Riccardo Leardi,et al.  Industrial experiences with multivariate statistical analysis of batch process data , 2006 .

[33]  Hiroyuki Honda,et al.  Industrial application of fuzzy control in bioprocesses. , 2004, Advances in biochemical engineering/biotechnology.

[34]  John F. MacGregor,et al.  Process monitoring and diagnosis by multiblock PLS methods , 1994 .

[35]  B Lennox,et al.  Process monitoring of an industrial fed-batch fermentation. , 2001, Biotechnology and bioengineering.

[36]  H. Ijima,et al.  Development of a practical small-scale circulation bioreactor and application to a drug metabolism simulator , 2009 .

[37]  Hongjun Lin,et al.  Influence of elevated pH shocks on the performance of a submerged anaerobic membrane bioreactor , 2010 .

[38]  Svante Wold,et al.  Batch Process Modeling and MSPC , 2009 .

[39]  Ana P Ferreira,et al.  Study of the application of multiway multivariate techniques to model data from an industrial fermentation process. , 2007, Analytica chimica acta.

[40]  Sten Bay Jørgensen,et al.  Supervision of fed-batch fermentations , 1999 .

[41]  Rajagopalan Srinivasan,et al.  Online monitoring of multi-phase batch processes using phase-based multivariate statistical process control , 2008, Comput. Chem. Eng..

[42]  Jie Zhang,et al.  Process performance monitoring using multivariate statistical process control , 1996 .

[43]  John M. Woodley,et al.  Bioprocesses: Modeling needs for process evaluation and sustainability assessment , 2010, Comput. Chem. Eng..

[44]  Wen-An Yang Monitoring and diagnosing of mean shifts in multivariate manufacturing processes using two-level selective ensemble of learning vector quantization neural networks , 2015, J. Intell. Manuf..

[45]  Joseph S. Alford,et al.  Bioprocess control: Advances and challenges , 2006, Comput. Chem. Eng..