Antiviral Compounds from Codiaeum peltatum Targeted by a Multi-informative Molecular Networks Approach.

From a set of 292 Euphorbiaceae extracts, the use of a molecular networking (MN)-based prioritization approach highlighted three clusters (MN1-3) depicting ions from the bark extract of Codiaeum peltatum. Based on their putative antiviral potential and structural novelty, the MS-guided purification of compounds present in MN1 and MN2 afforded two new daphnane-type diterpenoid orthoesters (DDO), codiapeltines A (1) and B (2), the new actephilols B (3) and C (4), and four known 1,4-dioxane-fused phenanthrene dimers (5-8). The structures of the new compounds were elucidated by NMR spectroscopic data analysis, and the absolute configurations of compounds 1 and 2 were deduced by comparison of experimental and calculated ECD spectra. Codiapeltine B (2) is the first daphnane bearing a 9,11,13-orthoester moiety, establishing a new major structural class of DDO. Compounds 1-8 and four recently reported monoterpenyl quinolones (9-12) detected in MN3 were investigated for their selective activities against chikungunya virus replication and their antipolymerase activities against the NS5 proteins of dengue and zika viruses. Compounds 3-8 exhibited strong inhibitory activities on both dengue and zika NS5 in primary assays, but extensive biological analyses indicated that only actephilol B (3) displayed a specific interaction with the NS5 targets.

[1]  Natalie I. Tasman,et al.  A Cross-platform Toolkit for Mass Spectrometry and Proteomics , 2012, Nature Biotechnology.

[2]  J. Neyts,et al.  Isolation of Premyrsinane, Myrsinane, and Tigliane Diterpenoids from Euphorbia pithyusa Using a Chikungunya Virus Cell-Based Assay and Analogue Annotation by Molecular Networking. , 2017, Journal of natural products.

[3]  C. Pannecouque,et al.  Antiviral Activity of Flexibilane and Tigliane Diterpenoids from Stillingia lineata. , 2015, Journal of natural products.

[4]  T. Kang,et al.  Tigliane diterpenoids from the Euphorbiaceae and Thymelaeaceae families. , 2015, Chemical reviews.

[5]  David I. Stuart,et al.  Structure and functionality in flavivirus NS-proteins: Perspectives for drug design , 2010, Antiviral research.

[6]  A. Willis,et al.  Bioactive compounds from the roots of Strophioblachia fimbricalyx. , 2013, Journal of natural products.

[7]  S. Zhang,et al.  Trigoxyphins A-G: diterpenes from Trigonostemon xyphophylloides. , 2010, Journal of natural products.

[8]  C. Pannecouque,et al.  Antiviral Activity of Diterpene Esters on Chikungunya Virus and HIV Replication. , 2015, Journal of natural products.

[9]  Julien Paolini,et al.  Advanced Structural Determination of Diterpene Esters Using Molecular Modeling and NMR Spectroscopy. , 2015, Journal of natural products.

[10]  M. Rohmer,et al.  Flavonoids: true or promiscuous inhibitors of enzyme? The case of deoxyxylulose phosphate reductoisomerase. , 2015, Bioorganic chemistry.

[11]  Matej Oresic,et al.  MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data , 2010, BMC Bioinformatics.

[12]  G. Oliva,et al.  Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase , 2017, Nature Communications.

[13]  Shuzhao Li,et al.  One Step Forward for Reducing False Positive and False Negative Compound Identifications from Mass Spectrometry Metabolomics Data: New Algorithms for Constructing Extracted Ion Chromatograms and Detecting Chromatographic Peaks. , 2017, Analytical chemistry.

[14]  G. Pijlman,et al.  Mosquito co-infection with Zika and chikungunya virus allows simultaneous transmission without affecting vector competence of Aedes aegypti , 2017, PLoS neglected tropical diseases.

[15]  J. Hohmann,et al.  Euphorbia diterpenes: isolation, structure, biological activity, and synthesis (2008-2012). , 2014, Chemical reviews.

[16]  J. Neyts,et al.  Trigocherrierin A, a Potent Inhibitor of Chikungunya Virus Replication , 2014, Molecules.

[17]  Julien Paolini,et al.  Evaluation of Jatrophane Esters from Euphorbia spp. as Modulators of Candida albicans Multidrug Transporters. , 2017, Journal of natural products.

[18]  C. Pannecouque,et al.  Bioactive Natural Products Prioritization Using Massive Multi-informational Molecular Networks. , 2017, ACS chemical biology.

[19]  V. Lanzotti Diterpenes for Therapeutic Use , 2013 .

[20]  H. Malet,et al.  The flavivirus polymerase as a target for drug discovery. , 2008, Antiviral research.

[21]  Kristian Fog Nielsen,et al.  Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking , 2016, Nature Biotechnology.

[22]  L. Delang,et al.  Tigliane diterpenes from Croton mauritianus as inhibitors of chikungunya virus replication. , 2014, Fitoterapia.

[23]  J. Yue,et al.  Plant orthoesters. , 2009, Chemical reviews.

[24]  O. O'Connor,et al.  Co-infection with Zika and Dengue Viruses in 2 Patients, New Caledonia, 2014 , 2015, Emerging infectious diseases.

[25]  C. Pannecouque,et al.  Jatrophane diterpenes as inhibitors of chikungunya virus replication: structure-activity relationship and discovery of a potent lead. , 2014, Journal of natural products.

[26]  Marc Litaudon,et al.  MZmine 2 Data-Preprocessing To Enhance Molecular Networking Reliability. , 2017, Analytical chemistry.

[27]  Hiromasa Kiyota,et al.  Chemical and pharmacological research of the plants in genus Euphorbia. , 2008, Chemical reviews.

[28]  Mary E. Wilson,et al.  Chikungunya fever: an epidemiological review of a re-emerging infectious disease. , 2009, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[29]  B. Canard,et al.  Antiviral chlorinated daphnane diterpenoid orthoesters from the bark and wood of Trigonostemon cherrieri. , 2012, Phytochemistry.

[30]  B. Canard,et al.  Substrate selectivity of Dengue and Zika virus NS5 polymerase towards 2′‐modified nucleotide analogues , 2017, Antiviral research.

[31]  Marc Litaudon,et al.  Optimized experimental workflow for tandem mass spectrometry molecular networking in metabolomics , 2017, Analytical and Bioanalytical Chemistry.

[32]  Hong-ping He,et al.  Trigonosins A-F, daphnane diterpenoids from Trigonostemon thyrsoideum. , 2011, Journal of natural products.

[33]  A. D. de Silva,et al.  The Emerging Zika Virus Epidemic in the Americas: Research Priorities. , 2016, JAMA.

[34]  L. Delang,et al.  Prostratin and 12-O-tetradecanoylphorbol 13-acetate are potent and selective inhibitors of Chikungunya virus replication. , 2012, Journal of natural products.

[35]  P. Allard,et al.  Trigocherrin A, the first natural chlorinated daphnane diterpene orthoester from Trigonostemon cherrieri. , 2012, Organic letters.

[36]  J. Leysen,et al.  Daphnane-type diterpene orthoesters and their biological activities. , 2002, Mini reviews in medicinal chemistry.