Automated Three-Dimensional Analysis of Histological and Autoradiographic Rat Brain Sections: Application to an Activation Study

[1]  G. Bonvento,et al.  siRNA targeted against amyloid precursor protein impairs synaptic activity in vivo , 2006, Neurobiology of Aging.

[2]  Alain Pitiot,et al.  Piecewise affine registration of biological images for volume reconstruction , 2006, Medical Image Anal..

[3]  Latifa Rbah,et al.  A comparison of in vivo and in vitro neuroimaging of 5-HT1A receptor binding sites in the cat brain , 2006, Journal of Chemical Neuroanatomy.

[4]  C. B. Smith,et al.  Resolution, sensitivity and precision with autoradiography and small animal positron emission tomography: implications for functional brain imaging in animal research. , 2005, Nuclear medicine and biology.

[5]  G. Bonvento,et al.  Towards a routine analysis of anatomical and functional post mortem slices in 3 dimensions , 2005 .

[6]  Kwang Suk Park,et al.  Voxel-based statistical analysis of cerebral glucose metabolism in the rat cortical deafness model by 3D reconstruction of brain from autoradiographic images , 2005, European Journal of Nuclear Medicine and Molecular Imaging.

[7]  Jun Yang,et al.  Statistical parametric mapping applied to an autoradiographic study of cerebral activation during treadmill walking in rats , 2004, NeuroImage.

[8]  Grégoire Malandain,et al.  Fusion of autoradiographs with an MR volume using 2-D and 3-D linear transformations , 2004, NeuroImage.

[9]  Jeih-San Liow,et al.  Absolute quantification of regional cerebral glucose utilization in mice by 18F-FDG small animal PET scanning and 2-14C-DG autoradiography. , 2004, Journal of nuclear medicine : official publication, Society of Nuclear Medicine.

[10]  Jesper L. R. Andersson,et al.  A template for spatial normalisation of MR images of the rat brain , 2003, Journal of Neuroscience Methods.

[11]  Y Chen,et al.  A stereotactic method for the three-dimensional registration of multi-modality biologic images in animals: NMR, PET, histology, and autoradiography. , 2003, Medical physics.

[12]  Fabrice Heitz,et al.  A robust statistics-based global energy function for the alignment of serially acquired autoradiographic sections , 2003, Journal of Neuroscience Methods.

[13]  Jing-Huei Lee,et al.  In vivo comparative imaging of dopamine D2 knockout and wild-type mice with (11)C-raclopride and microPET. , 2002, Journal of nuclear medicine : official publication, Society of Nuclear Medicine.

[14]  H. Benali,et al.  BrainVISA: Software platform for visualization and analysis of multi-modality brain data , 2001, NeuroImage.

[15]  Sébastien Ourselin,et al.  Reconstructing a 3D structure from serial histological sections , 2001, Image Vis. Comput..

[16]  Simon R. Cherry,et al.  Deficits in Striatal Dopamine D2 Receptors and Energy Metabolism Detected by in Vivo MicroPET Imaging in a Rat Model of Huntington's Disease , 2000, Experimental Neurology.

[17]  Jean-Francois Mangin,et al.  Robust Brain Segmentation Using Histogram Scale-Space Analysis and Mathematical Morphology , 1998, MICCAI.

[18]  Andreas Hess,et al.  BrainView: a computer program for reconstruction and interactive visualization of 3D data sets 1 The software will be freely available via ftp://ftp.ifn-magdeburg.de/pub/BrainView/ 1 , 1998, Journal of Neuroscience Methods.

[19]  Andreas Hess,et al.  A new method for reliable and efficient reconstruction of 3-dimensional images from autoradiographs of brain sections , 1998, Journal of Neuroscience Methods.

[20]  Michael Unser,et al.  A pyramid approach to subpixel registration based on intensity , 1998, IEEE Trans. Image Process..

[21]  James S. Duncan,et al.  A robust point-matching algorithm for autoradiograph alignment , 1997, Medical Image Anal..

[22]  Charles R. Meyer,et al.  Mutual Information for Automated Unwarping of Rat Brain Autoradiographs , 1997, NeuroImage.

[23]  James S. Duncan,et al.  A Robust Point Matching Algorithm for Autoradiograph Alignment , 1996, VBC.

[24]  W Zhao,et al.  Three-Dimensional Quantitative Autoradiography by Disparity Analysis: Theory and Application to Image Averaging of Local Cerebral Glucose Utilization , 1995, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

[25]  K. Allen,et al.  Metabolic activity in rat visual system during exposure to high and low intensities of patterned and diffuse light. , 1995, The International journal of neuroscience.

[26]  Alberto F. Goldszal,et al.  Three-Dimensional Reconstruction of Activated Columns from 2-[14C]Deoxy-d-glucose Data , 1995, NeuroImage.

[27]  N. E. Larsen,et al.  Computer-assisted three-dimensional reconstruction of the hippocampal region based on serial sections , 1991, Journal of Neuroscience Methods.

[28]  A Diaspro,et al.  IMAGO: a complete system for acquisition, processing, two/three-dimensional and temporal display of microscopic bio-images. , 1990, Computer methods and programs in biomedicine.

[29]  A. R. McIntosh,et al.  Movement and novelty of a square wave display affect 2-deoxyglucose uptake in the rat visual system , 1989, Behavioural Brain Research.

[30]  Lyndon S. Hibbard,et al.  Objective image alignment for three-dimensional reconstruction of digital autoradiograms , 1988, Journal of Neuroscience Methods.

[31]  B. J. Rooney,et al.  Effects of square-wave gratings and diffuse light on metabolic activity in the rat visual system , 1988, Brain Research.

[32]  Arthur W. Toga,et al.  Image Analysis of Brain Physiology , 1985, IEEE Computer Graphics and Applications.

[33]  G. Jeffery,et al.  Retinal ganglion cell death and terminal field retraction in the developing rodent visual system. , 1984, Brain research.

[34]  C. R. Gallistel,et al.  Resolution-limiting factors in 2-deoxyglucose autoradiography. I. Factors other than Diffusion , 1983, Brain Research.

[35]  L. Sokoloff,et al.  The [14C]deoxyglucose method: four years later. , 1979, Acta neurologica Scandinavica. Supplementum.

[36]  L. Sokoloff,et al.  RELATION BETWEEN PHYSIOLOGICAL FUNCTION AND ENERGY METABOLISM IN THE CENTRAL NERVOUS SYSTEM , 1977, Journal of neurochemistry.