Ornithinimicrobium cavernae sp. nov., an actinobacterium isolated from a karst cave

[1]  H. Kasai,et al.  Frondibacter mangrovi sp. nov., a member of the family Flavobacteriaceae isolated from seawater by in situ cultivation, and emended description of Frondibacter aureus. , 2017, International journal of systematic and evolutionary microbiology.

[2]  Yu-Qin Zhang,et al.  Ornithinimicrobium flavum sp. nov., isolated from the leaf of Paris polyphylla. , 2017, International journal of systematic and evolutionary microbiology.

[3]  J. Chun,et al.  Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies , 2017, International journal of systematic and evolutionary microbiology.

[4]  R. Rosselló-Móra,et al.  Introducing a digital protologue: a timely move towards a database-driven systematics of archaea and bacteria , 2017, Antonie van Leeuwenhoek.

[5]  Minoru Kanehisa,et al.  KEGG: new perspectives on genomes, pathways, diseases and drugs , 2016, Nucleic Acids Res..

[6]  Sudhir Kumar,et al.  MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. , 2016, Molecular biology and evolution.

[7]  Robert D. Finn,et al.  The Pfam protein families database: towards a more sustainable future , 2015, Nucleic Acids Res..

[8]  C. Sasikala,et al.  Ornithinimicrobium algicola sp. nov., a marine actinobacterium isolated from the green alga of the genus Ulva. , 2015, International journal of systematic and evolutionary microbiology.

[9]  Hong Ming,et al.  Thermus caliditerrae sp. nov., a novel thermophilic species isolated from a geothermal area. , 2014, International journal of systematic and evolutionary microbiology.

[10]  Y. Liu,et al.  Ornithinimicrobium tianjinense sp. nov., isolated from a recirculating aquaculture system. , 2013, International journal of systematic and evolutionary microbiology.

[11]  Shukun Tang,et al.  Paenibacillus frigoriresistens sp. nov., a novel psychrotroph isolated from a peat bog in Heilongjiang, Northern China , 2012, Antonie van Leeuwenhoek.

[12]  Oliver Eulenstein,et al.  Genome-scale phylogenetics: inferring the plant tree of life from 18,896 gene trees. , 2011, Systematic biology.

[13]  Shukun Tang,et al.  Zhihengliuella alba sp. nov., and emended description of the genus Zhihengliuella. , 2009, International journal of systematic and evolutionary microbiology.

[14]  E. Stackebrandt,et al.  Georgenia ruanii sp. nov., a novel actinobacterium isolated from forest soil in Yunnan (China), and emended description of the genus Georgenia. , 2007, International journal of systematic and evolutionary microbiology.

[15]  A. Stamatakis RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models , 2006, Bioinform..

[16]  S. Mayilraj,et al.  Ornithinimicrobium kibberense sp. nov., isolated from the Indian Himalayas. , 2006, International journal of systematic and evolutionary microbiology.

[17]  Shukun Tang,et al.  Naxibacter alkalitolerans gen. nov., sp. nov., a novel member of the family 'Oxalobacteraceae' isolated from China. , 2005, International journal of systematic and evolutionary microbiology.

[18]  Robert C. Edgar,et al.  MUSCLE: multiple sequence alignment with high accuracy and high throughput. , 2004, Nucleic acids research.

[19]  Peter G. Harrison,et al.  SPADES - a process algebra for discrete event simulation , 2000, J. Log. Comput..

[20]  J. Thompson,et al.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. , 1997, Nucleic acids research.

[21]  E. Stackebrandt,et al.  Proposal for a New Hierarchic Classification System, Actinobacteria classis nov. , 1997 .

[22]  Ronald M. Atlas,et al.  Handbook of microbiological media , 1993 .

[23]  N. Saitou,et al.  The neighbor-joining method: a new method for reconstructing phylogenetic trees. , 1987, Molecular biology and evolution.

[24]  J. Felsenstein CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP , 1985, Evolution; international journal of organic evolution.

[25]  D. Minnikin,et al.  AN INTEGRATED PROCEDURE FOR THE EXTRACTION OF BACTERIAL ISOPRENOID QUINONES AND POLAR LIPIDS , 1984 .

[26]  M. Kimura,et al.  The neutral theory of molecular evolution. , 1983, Scientific American.

[27]  J. Tamaoka,et al.  Analysis of bacterial menaquinone mixtures by high performance liquid chromatography , 1983 .

[28]  J. Buck,et al.  Nonstaining (KOH) method for determination of gram reactions of marine bacteria , 1982, Applied and environmental microbiology.

[29]  M. Kimura A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences , 1980, Journal of Molecular Evolution.

[30]  M. Collins,et al.  Lipids in the Classification and Identification of Coryneform Bacteria Containing Peptidoglycans Based on 2, 4‐diaminobutyric Acid , 1980 .

[31]  M. Collins,et al.  Fatty acid and polar lipid composition in the classification of Cellulomonas, Oerskovia and related taxa , 1979 .

[32]  M. Collins,et al.  Distribution of menaquinones in actinomycetes and corynebacteria. , 1977, Journal of general microbiology.

[33]  W. Fitch Toward Defining the Course of Evolution: Minimum Change for a Specific Tree Topology , 1971 .

[34]  E. B. Shirling,et al.  Methods for characterization of Streptomyces species , 1966 .

[35]  P. Kämpfer,et al.  Ornithinimicrobium murale sp. nov., isolated from an indoor wall colonized by moulds. , 2013, International journal of systematic and evolutionary microbiology.

[36]  Cheng-Ying Jiang,et al.  Ornithinimicrobium pekingense sp. nov., isolated from activated sludge. , 2008, International journal of systematic and evolutionary microbiology.

[37]  J. Felsenstein Evolutionary trees from DNA sequences: A maximum likelihood approach , 2005, Journal of Molecular Evolution.

[38]  E. Stackebrandt,et al.  Ornithinimicrobium humiphilum gen. nov., sp. nov., a novel soil actinomycete with L-ornithine in the peptidoglycan. , 2001, International journal of systematic and evolutionary microbiology.

[39]  Michael Y. Galperin,et al.  The COG database: a tool for genome-scale analysis of protein functions and evolution , 2000, Nucleic Acids Res..

[40]  R. Kroppenstedt Separation of Bacterial Menaquinones by HPLC Using Reverse Phase (RP18) and a Silver Loaded Ion Exchanger as Stationary Phases , 1982 .

[41]  R. Gordon,et al.  Nocardia coeliaca, Nocardia autotrophica, and the Nocardin Strain , 1974 .

[42]  S. Waksman The Actinomycetes. A summary of current knowledge. , 1967 .

[43]  Miriam L. Land,et al.  Trace: Tennessee Research and Creative Exchange Prodigal: Prokaryotic Gene Recognition and Translation Initiation Site Identification Recommended Citation Prodigal: Prokaryotic Gene Recognition and Translation Initiation Site Identification , 2022 .

[44]  Alexandra J. Scott,et al.  Bioinformatics Applications Note Phylogenomic Analysis of Bacterial and Archaeal Sequences with Amphora2 , 2022 .