General method for site-specific protein immobilization by Staudinger ligation.

Protein microarrays are playing an increasingly important role in the discovery and characterization of protein-ligand interactions. The uniform orientation conferred by site-specific immobilization is a demonstrable advantage in using such microarrays. Here, we report on a general strategy for fabricating gold surfaces displaying a protein in a uniform orientation. An azido group was installed at the C-terminus of a model protein, bovine pancreatic ribonuclease, by using the method of expressed protein ligation and a synthetic bifunctional reagent. This azido protein was immobilized by Staudinger ligation to a phosphinothioester-displaying self-assembled monolayer on a gold surface. Immobilization proceeded rapidly and selectively via the azido group. The immobilized enzyme retained its catalytic activity and was able to bind to its natural ligand, the ribonuclease inhibitor protein. This strategy provides a general means to fabricate microarrays displaying proteins in a uniform orientation.

[1]  J. Kalia,et al.  Reactivity of Intein Thioesters: Appending a Functional Group to a Protein , 2006, Chembiochem : a European journal of chemical biology.

[2]  N. Abbott,et al.  Characterization of protein immobilization at silver surfaces by near edge X-ray absorption fine structure spectroscopy. , 2006, Langmuir : the ACS journal of surfaces and colloids.

[3]  C. Poulter,et al.  Regio- and chemoselective covalent immobilization of proteins through unnatural amino acids. , 2006, Journal of the American Chemical Society.

[4]  T. A. Taton,et al.  Site-specific, covalent attachment of proteins to a solid surface. , 2006, Bioconjugate chemistry.

[5]  R. Raines,et al.  Reaction mechanism and kinetics of the traceless Staudinger ligation. , 2006, Journal of the American Chemical Society.

[6]  Chang-Hyun Jang,et al.  Anchoring of nematic liquid crystals on viruses with different envelope structures. , 2006, Nano letters.

[7]  S. Kingsmore Multiplexed protein measurement: technologies and applications of protein and antibody arrays , 2006, Nature Reviews Drug Discovery.

[8]  J. Hoheisel Microarray technology: beyond transcript profiling and genotype analysis , 2006, Nature Reviews Microbiology.

[9]  Mahesh Uttamchandani,et al.  Microarray: a versatile platform for high-throughput functional proteomics. , 2006, Combinatorial chemistry & high throughput screening.

[10]  R. Goody,et al.  Site-selective protein immobilization by Staudinger ligation. , 2006, Angewandte Chemie.

[11]  H. Lehrach,et al.  Recent advances of protein microarrays , 2005, Current Opinion in Chemical Biology.

[12]  K. Knepper,et al.  Organic Azides: An Exploding Diversity of a Unique Class of Compounds , 2005 .

[13]  Christopher T. Walsh,et al.  Posttranslational Modification of Proteins: Expanding Nature's Inventory , 2005 .

[14]  P. Predki,et al.  Functional protein microarrays: just how functional are they? , 2005, Current opinion in biotechnology.

[15]  Xiao-Yang Zhu,et al.  Enzymatic activity on a chip: The critical role of protein orientation , 2005, Proteomics.

[16]  R. Breinbauer,et al.  The Staudinger ligation-a gift to chemical biology. , 2004, Angewandte Chemie.

[17]  S. Yao,et al.  Strategies for immobilization of biomolecules in a microarray. , 2004, Combinatorial chemistry & high throughput screening.

[18]  Dev Kambhampati,et al.  Protein microarray technology , 2003 .

[19]  Herbert Waldmann,et al.  Staudinger ligation: a new immobilization strategy for the preparation of small-molecule arrays. , 2003, Angewandte Chemie.

[20]  Ronald T. Raines,et al.  Site-specific protein immobilization by Staudinger ligation. , 2003, Journal of the American Chemical Society.

[21]  S. Saavedra,et al.  Molecular Orientation Distributions in Protein Films. V. Cytochrome c Adsorbed to a Sulfonate-Terminated, Self-Assembled Monolayer† , 2003 .

[22]  S. Nock,et al.  Recent developments in protein microarray technology. , 2003, Angewandte Chemie.

[23]  P. Peluso,et al.  Optimizing antibody immobilization strategies for the construction of protein microarrays. , 2003, Analytical biochemistry.

[24]  Ronald T. Raines,et al.  Fluorescence assay for the binding of ribonuclease A to the ribonuclease inhibitor protein. , 2002, Analytical biochemistry.

[25]  M. Gerstein,et al.  Global Analysis of Protein Activities Using Proteome Chips , 2001, Science.

[26]  R. Raines,et al.  High‐Yielding Staudinger Ligation of a Phosphinothioester and Azide to Form a Peptide. , 2001 .

[27]  R. Raines,et al.  A highly active immobilized ribonuclease. , 2000, Analytical biochemistry.

[28]  S. Schreiber,et al.  Printing proteins as microarrays for high-throughput function determination. , 2000, Science.

[29]  S J Tendler,et al.  Surface plasmon resonance analysis of dynamic biological interactions with biomaterials. , 2000, Biomaterials.

[30]  M. Sussman,et al.  Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array , 1999, Nature Biotechnology.

[31]  G M Whitesides,et al.  A strategy for the generation of surfaces presenting ligands for studies of binding based on an active ester as a common reactive intermediate: a surface plasmon resonance study. , 1999, Analytical chemistry.

[32]  V K Gupta,et al.  Optical amplification of ligand-receptor binding using liquid crystals. , 1998, Science.

[33]  Shih-Song Cheng,et al.  Molecular Orientation Distributions in Protein Films. 2. Site-Directed Immobilization of Yeast Cytochrome c on Thiol-Capped, Self-Assembled Monolayers , 1997 .

[34]  C. Gibbs,et al.  A nickel chelate microtiter plate assay for six histidine-containing proteins. , 1996, Analytical biochemistry.

[35]  S. Sakakibara,et al.  Chemical synthesis of proteins. , 1995, Biopolymers.

[36]  K. Mullis The Polymerase Chain Reaction (Nobel Lecture). , 1994 .

[37]  G. Whitesides,et al.  Adsorption of proteins onto surfaces containing end-attached oligo(ethylene oxide): a model system using self-assembled monolayers , 1993 .

[38]  J. Butler,et al.  The physical and functional behavior of capture antibodies adsorbed on polystyrene. , 1992, Journal of immunological methods.

[39]  M. Caruthers Chemical Synthesis of DNA and DNA Analogues , 1992 .

[40]  M. Caruthers,et al.  Chemical synthesis of DNA and DNA analogs , 1991 .

[41]  Xue-Long Sun,et al.  Carbohydrate and protein immobilization onto solid surfaces by sequential Diels-Alder and azide-alkyne cycloadditions. , 2006, Bioconjugate chemistry.

[42]  Ronald T. Raines,et al.  Ribonuclease inhibitor: structure and function. , 2005, Progress in nucleic acid research and molecular biology.

[43]  R. Raines,et al.  Staudinger ligation of alpha-azido acids retains stereochemistry. , 2002, The Journal of organic chemistry.

[44]  D. Botstein,et al.  Exploring the new world of the genome with DNA microarrays , 1999, Nature Genetics.

[45]  S. P. Fodor,et al.  High density synthetic oligonucleotide arrays , 1999, Nature Genetics.