Template Scoring Methods for Protein Torsion Angle Prediction
暂无分享,去创建一个
[1] Gianluca Pollastri,et al. Beyond the Twilight Zone: Automated prediction of structural properties of proteins by recursive neural networks and remote homology information , 2009, Proteins.
[2] Alessandro Vullo,et al. Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks , 2009, BMC Structural Biology.
[3] B. Rost,et al. A modified definition of Sov, a segment‐based measure for protein secondary structure prediction assessment , 1999, Proteins.
[4] Guoli Wang,et al. PISCES: recent improvements to a PDB sequence culling server , 2005, Nucleic Acids Res..
[5] Peisheng Cong,et al. SPSSM8: an accurate approach for predicting eight-state secondary structures of proteins. , 2013, Biochimie.
[6] Gajendra P. S. Raghava,et al. Evaluation of Protein Dihedral Angle Prediction Methods , 2014, PloS one.
[7] S. Henikoff,et al. Position-based sequence weights. , 1994, Journal of molecular biology.
[8] Jianlin Cheng,et al. Machine Learning Methods for Protein Structure Prediction , 2008, IEEE Reviews in Biomedical Engineering.
[9] A. Bax,et al. TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts , 2009, Journal of biomolecular NMR.
[10] Guoli Wang,et al. PISCES: a protein sequence culling server , 2003, Bioinform..
[11] Sitao Wu,et al. ANGLOR: A Composite Machine-Learning Algorithm for Protein Backbone Torsion Angle Prediction , 2008, PloS one.
[12] David Kim,et al. Feature Selection Methods for Improving Protein Structure Prediction with Rosetta , 2007, NIPS.
[13] A. Biegert,et al. HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment , 2011, Nature Methods.
[14] Thomas L. Madden,et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.
[15] Y. Duan,et al. Trends in template/fragment-free protein structure prediction , 2010, Theoretical chemistry accounts.
[16] Jeff A. Bilmes,et al. Learning sparse models for a dynamic Bayesian network classifier of protein secondary structure , 2011, BMC Bioinformatics.
[17] Lukasz A. Kurgan,et al. SPINE X: Improving protein secondary structure prediction by multistep learning coupled with prediction of solvent accessible surface area and backbone torsion angles , 2012, J. Comput. Chem..
[18] Geoffrey I. Webb,et al. TANGLE: Two-Level Support Vector Regression Approach for Protein Backbone Torsion Angle Prediction from Primary Sequences , 2012, PloS one.
[19] George Karypis,et al. Introduction to Protein Structure Prediction: Methods and Algorithms , 2010 .
[20] David S. Wishart,et al. PREDITOR: a web server for predicting protein torsion angle restraints , 2006, Nucleic Acids Res..
[21] Johannes Söding,et al. Protein homology detection by HMM?CHMM comparison , 2005, Bioinform..
[22] Sitao Wu,et al. MUSTER: Improving protein sequence profile–profile alignments by using multiple sources of structure information , 2008, Proteins.
[23] Jeff G. Schneider,et al. Protein subcellular location pattern classification in cellular images using latent discriminative models , 2012, Bioinform..
[24] Peisheng Cong,et al. DSP: a protein shape string and its profile prediction server , 2012, Nucleic Acids Res..
[25] U. Hobohm,et al. Enlarged representative set of protein structures , 1994, Protein science : a publication of the Protein Society.
[26] Dapeng Li,et al. A novel structural position-specific scoring matrix for the prediction of protein secondary structures , 2012, Bioinform..
[27] D T Jones,et al. Protein secondary structure prediction based on position-specific scoring matrices. , 1999, Journal of molecular biology.
[28] Alessandro Vullo,et al. Accurate prediction of protein secondary structure and solvent accessibility by consensus combiners of sequence and structure information , 2007, BMC Bioinformatics.