On Near-Optimal Alignments of Biological Sequences
暂无分享,去创建一个
[1] Michael S. Waterman,et al. A dynamic programming algorithm to find all solutions in a neighborhood of the optimum , 1985 .
[2] M. Pollack. Letter to the Editor—The kth Best Route Through a Network , 1961 .
[3] Aarni Perko,et al. Implementation of algorithms for K shortest loopless paths , 1986, Networks.
[4] O. Gotoh. An improved algorithm for matching biological sequences. , 1982, Journal of molecular biology.
[5] T. T. Wu,et al. AN ANALYSIS OF THE SEQUENCES OF THE VARIABLE REGIONS OF BENCE JONES PROTEINS AND MYELOMA LIGHT CHAINS AND THEIR IMPLICATIONS FOR ANTIBODY COMPLEMENTARITY , 1970, The Journal of experimental medicine.
[6] M. Zuker. Suboptimal sequence alignment in molecular biology. Alignment with error analysis. , 1991, Journal of molecular biology.
[7] A. Lesk,et al. How different amino acid sequences determine similar protein structures: the structure and evolutionary dynamics of the globins. , 1980, Journal of molecular biology.
[8] M S Waterman,et al. Sequence alignments in the neighborhood of the optimum with general application to dynamic programming. , 1983, Proceedings of the National Academy of Sciences of the United States of America.
[9] A M Lesk,et al. The evolution of protein structures. , 1987, Cold Spring Harbor symposia on quantitative biology.
[10] M J Sternberg,et al. A simple method to generate non-trivial alternate alignments of protein sequences. , 1991, Journal of molecular biology.
[11] Douglas R. Shier,et al. On algorithms for finding the k shortest paths in a network , 1979, Networks.
[12] Stuart E. Dreyfus,et al. An Appraisal of Some Shortest-Path Algorithms , 1969, Oper. Res..
[13] A. Lesk,et al. The relation between the divergence of sequence and structure in proteins. , 1986, The EMBO journal.
[14] G. Gonnet,et al. Exhaustive matching of the entire protein sequence database. , 1992, Science.
[15] Richard Pavley,et al. A Method for the Solution of the Nth Best Path Problem , 1959, JACM.
[16] M. Waterman,et al. A new algorithm for best subsequence alignments with application to tRNA-rRNA comparisons. , 1987, Journal of molecular biology.
[17] S. Henikoff,et al. Amino acid substitution matrices from protein blocks. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[18] M S Waterman,et al. A local algorithm for DNA sequence alignment with inversions. , 1992, Bulletin of mathematical biology.
[19] Toshihide Ibaraki,et al. An efficient algorithm for K shortest simple paths , 1982, Networks.
[20] Richard M. Karp,et al. Theoretical Improvements in Algorithmic Efficiency for Network Flow Problems , 1972, Combinatorial Optimization.
[21] T. Smith,et al. Optimal sequence alignments. , 1983, Proceedings of the National Academy of Sciences of the United States of America.
[22] E. Lander,et al. Parametric sequence comparisons. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[23] P. Argos,et al. Determination of reliable regions in protein sequence alignments. , 1990, Protein engineering.
[24] Peter H. Sellers,et al. An Algorithm for the Distance Between Two Finite Sequences , 1974, J. Comb. Theory, Ser. A.