Characterization of heterotypic interaction effects in vitro to deconvolute global gene expression profiles in cancer
暂无分享,去创建一个
Trevor Hastie | T. Hastie | P. Brown | T. Nielsen | R. Pesich | D. Nuyten | Patrick O Brown | Torsten Nielsen | Robert Pesich | Martin Buess | M. Buess | Dimitry SA Nuyten | Robert Pesich
[1] Howard Y. Chang,et al. Bone morphogenetic protein antagonist gremlin 1 is widely expressed by cancer-associated stromal cells and can promote tumor cell proliferation , 2006, Proceedings of the National Academy of Sciences.
[2] A. Ashworth,et al. Signalling Pathways Implicated in Early Mammary Gland Morphogenesis and Breast Cancer , 2006, PLoS genetics.
[3] A. Nobel,et al. The molecular portraits of breast tumors are conserved across microarray platforms , 2006, BMC Genomics.
[4] Trevor Hastie,et al. Gene Expression Programs in Response to Hypoxia: Cell Type Specificity and Prognostic Significance in Human Cancers , 2006, PLoS medicine.
[5] Eytan Domany,et al. Gene expression analysis reveals a strong signature of an interferon-induced pathway in childhood lymphoblastic leukemia as well as in breast and ovarian cancer , 2005, Oncogene.
[6] K. Horie-Inoue,et al. Estrogen-Responsive Finger Protein as a New Potential Biomarker for Breast Cancer , 2005, Clinical Cancer Research.
[7] S. Hayward,et al. Loss of TGF-β type II receptor in fibroblasts promotes mammary carcinoma growth and invasion through upregulation of TGF-α-, MSP- and HGF-mediated signaling networks , 2005, Oncogene.
[8] Tina Hernandez-Boussard,et al. Determination of Stromal Signatures in Breast Carcinoma , 2005, PLoS biology.
[9] Dennis C. Sgroi,et al. Stromal Fibroblasts Present in Invasive Human Breast Carcinomas Promote Tumor Growth and Angiogenesis through Elevated SDF-1/CXCL12 Secretion , 2005, Cell.
[10] J. K. Kim,et al. The interferon-inducible 9-27 gene modulates the susceptibility to natural killer cells and the invasiveness of gastric cancer cells. , 2005, Cancer letters.
[11] Howard Y. Chang,et al. Robustness, scalability, and integration of a wound-response gene expression signature in predicting breast cancer survival. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[12] Gavin Sherlock,et al. The Stanford Microarray Database accommodates additional microarray platforms and data formats , 2004, Nucleic Acids Res..
[13] J. Campisi,et al. Stromal-epithelial interactions in aging and cancer: senescent fibroblasts alter epithelial cell differentiation , 2004, Journal of Cell Science.
[14] S. Hayward,et al. Loss of TGF-beta type II receptor in fibroblasts promotes mammary carcinoma growth and invasion through upregulation of TGF-alpha-, MSP- and HGF-mediated signaling networks. , 2005, Oncogene.
[15] G. Cunha,et al. Role of mesenchymal-epithelial interactions in mammary gland development , 2005, Journal of Mammary Gland Biology and Neoplasia.
[16] Michael Peacock,et al. Hierarchical Clustering Analysis of Tissue Microarray Immunostaining Data Identifies Prognostically Significant Groups of Breast Carcinoma , 2004, Clinical Cancer Research.
[17] Giulio Gabbiani,et al. The stroma reaction myofibroblast: a key player in the control of tumor cell behavior. , 2004, The International journal of developmental biology.
[18] T. Ratliff. TGF-Beta Signaling in Fibroblasts Modulates the Oncogenic Potential of Adjacent Epithelia , 2004 .
[19] Rameen Beroukhim,et al. Molecular characterization of the tumor microenvironment in breast cancer. , 2004, Cancer cell.
[20] R. Weinberg,et al. Reconstruction of functionally normal and malignant human breast tissues in mice. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[21] Bernard Roizman,et al. STAT1 is overexpressed in tumors selected for radioresistance and confers protection from radiation in transduced sensitive cells. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[22] M. Washington,et al. TGF-ß Signaling in Fibroblasts Modulates the Oncogenic Potential of Adjacent Epithelia , 2004, Science.
[23] Ash A. Alizadeh,et al. Gene Expression Signature of Fibroblast Serum Response Predicts Human Cancer Progression: Similarities between Tumors and Wounds , 2004, PLoS biology.
[24] M. Sandri,et al. Conditioned Medium From MCF-7 Cell Line Induces Myofibroblast Differentiation, Decreased Cell Proliferation, and Increased Apoptosis in Cultured Normal Fibroblasts but not in Fibroblasts from Malignant Breast Tissue , 2001, The Histochemical Journal.
[25] Trevor Hastie,et al. Gene expression patterns in ovarian carcinomas. , 2003, Molecular biology of the cell.
[26] Klaus Pantel,et al. Molecular signature associated with bone marrow micrometastasis in human breast cancer. , 2003, Cancer research.
[27] K. Kita,et al. Involvement of LEU13 in Interferon-Induced Refractoriness of Human RSa Cells to Cell Killing by X Rays , 2003, Radiation research.
[28] Aleksey A. Nakorchevskiy,et al. Expression deconvolution: A reinterpretation of DNA microarray data reveals dynamic changes in cell populations , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[29] T. Golub,et al. A Mechanism of Cyclin D1 Action Encoded in the Patterns of Gene Expression in Human Cancer , 2003, Cell.
[30] D. Botstein,et al. Variation in gene expression patterns in human gastric cancers. , 2003, Molecular biology of the cell.
[31] R. Tibshirani,et al. Repeated observation of breast tumor subtypes in independent gene expression data sets , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[32] B. Hogan,et al. Tissue interactions pattern the mesenchyme of the embryonic mouse lung. , 2003, Developmental biology.
[33] R. Weichselbaum,et al. Tumour-endothelium interactions in co-culture: coordinated changes of gene expression profiles and phenotypic properties of endothelial cells , 2003, Journal of Cell Science.
[34] Ash A. Alizadeh,et al. Individuality and variation in gene expression patterns in human blood , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[35] M. Bissell,et al. Epithelial to mesenchymal transition in human breast cancer can provide a nonmalignant stroma. , 2003, The American journal of pathology.
[36] Yudong D. He,et al. A Gene-Expression Signature as a Predictor of Survival in Breast Cancer , 2002 .
[37] M. Mathews,et al. Neoplastic progression in melanoma and colon cancer is associated with increased expression and activity of the interferon-inducible protein kinase, PKR , 2002, Oncogene.
[38] Mina J Bissell,et al. The organizing principle: microenvironmental influences in the normal and malignant breast. , 2002, Differentiation; research in biological diversity.
[39] J. Derisi,et al. Microarray-based detection and genotyping of viral pathogens , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[40] Ash A. Alizadeh,et al. Software tools for high-throughput analysis and archiving of immunohistochemistry staining data obtained with tissue microarrays. , 2002, The American journal of pathology.
[41] David Botstein,et al. Diversity, topographic differentiation, and positional memory in human fibroblasts , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[42] O. Petersen,et al. Identification of EPSTI1, a novel gene induced by epithelial-stromal interaction in human breast cancer. , 2002, Genomics.
[43] Kozo Nakamura,et al. RANKL maintains bone homeostasis through c-Fos-dependent induction of interferon-β , 2002, Nature.
[44] Yudong D. He,et al. Gene expression profiling predicts clinical outcome of breast cancer , 2002, Nature.
[45] D. Botstein,et al. Diversity of gene expression in adenocarcinoma of the lung , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[46] Mina J. Bissell,et al. Putting tumours in context , 2001, Nature Reviews Cancer.
[47] R. Tibshirani,et al. Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[48] A. M. Arias. Epithelial Mesenchymal Interactions in Cancer and Development , 2001, Cell.
[49] R. Tibshirani,et al. Significance analysis of microarrays applied to the ionizing radiation response , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[50] E. Jonasch,et al. Interferon in oncological practice: review of interferon biology, clinical applications, and toxicities. , 2001, The oncologist.
[51] Christian A. Rees,et al. Molecular portraits of human breast tumours , 2000, Nature.
[52] M. Mathews,et al. Human breast cancer cells contain elevated levels and activity of the protein kinase, PKR , 2000, Oncogene.
[53] P. Hein,et al. Carcinoma-associated fibroblasts stimulate tumor progression of initiated human epithelium , 2000, Breast Cancer Research.
[54] H. Kolb,et al. Cutting Edge: Heat Shock Protein 60 Is a Putative Endogenous Ligand of the Toll-Like Receptor-4 Complex1 , 2000, The Journal of Immunology.
[55] D. Hanahan,et al. The Hallmarks of Cancer , 2000, Cell.
[56] Christian A. Rees,et al. Distinctive gene expression patterns in human mammary epithelial cells and breast cancers. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[57] D. Botstein,et al. The transcriptional program in the response of human fibroblasts to serum. , 1999, Science.
[58] D. Botstein,et al. Cluster analysis and display of genome-wide expression patterns. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[59] G. Stark,et al. How cells respond to interferons. , 1998, Annual review of biochemistry.
[60] N. Sonenberg,et al. Abrogation of translation initiation factor eIF‐2 phosphorylation causes malignant transformation of NIH 3T3 cells. , 1995, The EMBO journal.
[61] P. Chambon,et al. Identification of a new interferon-alpha-inducible gene (p27) on human chromosome 14q32 and its expression in breast carcinoma. , 1993, Cancer research.
[62] M. Bissell,et al. The influence of tissue microenvironment (stroma and extracellular matrix) on the development and function of mammary epithelium. , 1993, Epithelial cell biology.
[63] Jean Paul Thiery,et al. Expression of smooth muscle-specific proteins in myoepithelium and stromal myofibroblasts of normal and malignant human breast tissue. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[64] T. Hsu,et al. Fibroblast-mediated acceleration of human epithelial tumor growth in vivo. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[65] F. Stockdale,et al. Cell-cell interactions promote mammary epithelial cell differentiation , 1985, The Journal of cell biology.