Research of Dengue Fever Prediction in San Juan, Puerto Rico Based on a KNN Regression Model

Existed dengue prediction model associated with temperature data are always based on Poisson regression methods or linear models. However, these models are difficult to be applied to non-stationary climate data, such as rainfall or precipitation. A novel k-nearest neighbor (KNN) regression method was proposed to improve the prediction accuracy of dengue fever regression model in this paper. The dengue cases and the climatic factors (average minimum temperature, average maximum temperature, average temperature, average dew point temperature, temperature difference, relative humidity, absolute humidity, Precipitation) in San Juan, Puerto Rico during the period 1990–2013 were regressed by the KNN algorithm. The performances of KNN regression were studied by compared with correlation analysis and Poisson regression method. Results showed that the KNN model fitted real dengue outbreak better than Poisson regression method while the root mean square error was 6.88.

[1]  S. Tong,et al.  Dengue transmission in the Asia‐Pacific region: impact of climate change and socio‐environmental factors , 2011, Tropical medicine & international health : TM & IH.

[2]  Guohun Zhu,et al.  Prediction of dengue outbreak based on Poisson regression and support vector machine , 2016 .

[3]  Chung-Min Liao,et al.  Regional response of dengue fever epidemics to interannual variation and related climate variability , 2015, Stochastic Environmental Research and Risk Assessment.

[4]  S. Kaneko,et al.  Analysis of Effects of Meteorological Factors on Dengue Incidence in Sri Lanka Using Time Series Data , 2013, PloS one.

[5]  H. Margolis,et al.  Best Practices in Dengue Surveillance: A Report from the Asia-Pacific and Americas Dengue Prevention Boards , 2010, PLoS neglected tropical diseases.

[6]  Szu-Chieh Chen,et al.  Lagged temperature effect with mosquito transmission potential explains dengue variability in southern Taiwan: insights from a statistical analysis. , 2010, The Science of the total environment.

[7]  Gerardo Chowell,et al.  Climate-based descriptive models of dengue fever: the 2002 epidemic in Colima, Mexico. , 2006, Journal of environmental health.

[8]  M. Bangs,et al.  Climatic factors associated with epidemic dengue in Palembang, Indonesia: implications of short-term meteorological events on virus transmission. , 2006, The Southeast Asian journal of tropical medicine and public health.

[9]  K. smoyer-Tomic,et al.  Dengue epidemics and the El Niño Southern Oscillation , 2001 .

[10]  G. Carrasquilla,et al.  Efficacy of a tetravalent dengue vaccine in children in Latin America. , 2015, The New England journal of medicine.

[11]  Nicholas Jackson,et al.  Efficacy and Long-Term Safety of a Dengue Vaccine in Regions of Endemic Disease. , 2015, The New England journal of medicine.

[12]  S. Briolant,et al.  Predicting Dengue Fever Outbreaks in French Guiana Using Climate Indicators , 2016, PLoS neglected tropical diseases.

[13]  J. Keating,et al.  An investigation into the cyclical incidence of dengue fever. , 2001, Social science & medicine.

[14]  S. Cassadou,et al.  Time series analysis of dengue incidence in Guadeloupe, French West Indies: Forecasting models using climate variables as predictors , 2011, BMC infectious diseases.

[15]  R. Barrera,et al.  Population Dynamics of Aedes aegypti and Dengue as Influenced by Weather and Human Behavior in San Juan, Puerto Rico , 2011, PLoS neglected tropical diseases.

[16]  A. Wilder-Smith,et al.  Meteorological factors and El Niño Southern Oscillation are independently associated with dengue infections , 2011, Epidemiology and Infection.

[17]  M. Ferreira Geographical distribution of the association between El Niño South Oscillation and dengue fever in the Americas: a continental analysis using geographical information system-based techniques. , 2014, Geospatial health.

[18]  Morgan Mangeas,et al.  Climate-Based Models for Understanding and Forecasting Dengue Epidemics , 2012, PLoS neglected tropical diseases.

[19]  Chwan-Chuen King,et al.  Effects of the El Niño-Southern Oscillation on dengue epidemics in Thailand, 1996-2005 , 2009, BMC public health.

[20]  John S. Brownstein,et al.  The global distribution and burden of dengue , 2013, Nature.

[21]  D. Gubler,et al.  Resurgent vector-borne diseases as a global health problem. , 1998, Emerging infectious diseases.

[22]  E Massad,et al.  Modelling the control strategies against dengue in Singapore , 2007, Epidemiology and Infection.

[23]  B. Guy,et al.  Development of sanofi pasteur tetravalent dengue vaccine , 2010, Human vaccines.

[24]  Nigel J. Tapper,et al.  Regional variability in relationships between climate and dengue/DHF in Indonesia , 2007 .

[25]  Yuming Guo,et al.  Projecting the impact of climate change on dengue transmission in Dhaka, Bangladesh. , 2013, Environment international.