Separated Channel Attention Convolutional Neural Network (SC-CNN-Attention) to Identify ADHD in Multi-Site Rs-fMRI Dataset

The accurate identification of an attention deficit hyperactivity disorder (ADHD) subject has remained a challenge for both neuroscience research and clinical diagnosis. Unfortunately, the traditional methods concerning the classification model and feature extraction usually depend on the single-channel model and static measurements (i.e., functional connectivity, FC) in the small, homogenous single-site dataset, which is limited and may cause the loss of intrinsic information in functional MRI (fMRI). In this study, we proposed a new two-stage network structure by combing a separated channel convolutional neural network (SC-CNN) with an attention-based network (SC-CNN-attention) to discriminate ADHD and healthy controls on a large-scale multi-site database (5 sites and n = 1019). To utilize both intrinsic temporal feature and the interactions of temporal dependent in whole-brain resting-state fMRI, in the first stage of our proposed network structure, a SC- CNN is used to learn the temporal feature of each brain region, and an attention network in the second stage is adopted to capture temporal dependent features among regions and extract fusion features. Using a “leave-one-site-out” cross-validation framework, our proposed method obtained a mean classification accuracy of 68.6% on five different sites, which is higher than those reported in previous studies. The classification results demonstrate that our proposed network is robust to data variants and is also replicated across sites. The combination of the SC-CNN with the attention network is powerful to capture the intrinsic fMRI information to discriminate ADHD across multi-site resting-state fMRI data.

[1]  R. Barkley Issues in the diagnosis of attention-deficit/hyperactivity disorder in children , 2003, Brain and Development.

[2]  R. Barkley Behavioral inhibition, sustained attention, and executive functions: constructing a unifying theory of ADHD. , 1997, Psychological bulletin.

[3]  Jürgen Margraf,et al.  Is ADHD diagnosed in accord with diagnostic criteria? Overdiagnosis and influence of client gender on diagnosis. , 2012, Journal of consulting and clinical psychology.

[4]  Dong Ming,et al.  EEG oscillatory patterns and classification of sequential compound limb motor imagery , 2016, Journal of NeuroEngineering and Rehabilitation.

[5]  Brian A. Nosek,et al.  Power failure: why small sample size undermines the reliability of neuroscience , 2013, Nature Reviews Neuroscience.

[6]  Aimin Jiang,et al.  Identifying ADHD Individuals From Resting-State Functional Connectivity Using Subspace Clustering and Binary Hypothesis Testing , 2019, Journal of attention disorders.

[7]  Yoshua Bengio,et al.  Neural Machine Translation by Jointly Learning to Align and Translate , 2014, ICLR.

[8]  Russell Greiner,et al.  ADHD-200 Global Competition: diagnosing ADHD using personal characteristic data can outperform resting state fMRI measurements , 2012, Front. Syst. Neurosci..

[9]  Jared A. Nielsen,et al.  Multisite functional connectivity MRI classification of autism: ABIDE results , 2013, Front. Hum. Neurosci..

[10]  Yoshua Bengio,et al.  Show, Attend and Tell: Neural Image Caption Generation with Visual Attention , 2015, ICML.

[11]  Jingxin Nie,et al.  Different Developmental Pattern of Brain Activities in ADHD: A Study of Resting-State fMRI , 2018, Developmental Neuroscience.

[12]  Christopher D. Manning,et al.  Effective Approaches to Attention-based Neural Machine Translation , 2015, EMNLP.

[13]  Feifei Li,et al.  OpenTag: Open Attribute Value Extraction from Product Profiles , 2018, KDD.

[14]  Xiaodong Xie,et al.  FFA-Net: Feature Fusion Attention Network for Single Image Dehazing , 2019, AAAI.

[15]  Huiguang He,et al.  Classification of ADHD children through multimodal magnetic resonance imaging , 2012, Front. Syst. Neurosci..

[16]  Huan Liu,et al.  Feature Selection for Classification , 1997, Intell. Data Anal..

[17]  Christoforos Anagnostopoulos,et al.  Estimating time-varying brain connectivity networks from functional MRI time series , 2013, NeuroImage.

[18]  Ying Chen,et al.  ADHD classification by feature space separation with sparse representation , 2018, 2018 IEEE 23rd International Conference on Digital Signal Processing (DSP).

[19]  Vince D. Calhoun,et al.  Dynamic changes of spatial functional network connectivity in healthy individuals and schizophrenia patients using independent vector analysis , 2014, NeuroImage.

[20]  Dezhong Yao,et al.  The Time-Varying Network Patterns in Motor Imagery Revealed by Adaptive Directed Transfer Function Analysis for fMRI , 2018, IEEE Access.

[21]  Nicha C. Dvornek,et al.  Identifying Autism from Resting-State fMRI Using Long Short-Term Memory Networks , 2017, MLMI@MICCAI.

[22]  Yufeng Wang,et al.  Fisher discriminative analysis of resting-state brain function for attention-deficit/hyperactivity disorder , 2008, NeuroImage.

[23]  Russell Greiner,et al.  A general prediction model for the detection of ADHD and Autism using structural and functional MRI , 2018, PloS one.

[24]  Bram van Ginneken,et al.  A survey on deep learning in medical image analysis , 2017, Medical Image Anal..

[25]  Ljupco Kocarev,et al.  Machine learning approach for classification of ADHD adults. , 2014, International journal of psychophysiology : official journal of the International Organization of Psychophysiology.

[26]  Barbara Franke,et al.  Meta-Analysis of Genome-Wide Association Studies On Adult Attention-Deficit and Hyperactivity Disorder , 2019, European Neuropsychopharmacology.

[27]  Lianghua He,et al.  Classification on ADHD with Deep Learning , 2014, 2014 International Conference on Cloud Computing and Big Data.

[28]  Daoqiang Zhang,et al.  Network-based classification of ADHD patients using discriminative subnetwork selection and graph kernel PCA , 2016, Comput. Medical Imaging Graph..

[29]  N. Tzourio-Mazoyer,et al.  Automated Anatomical Labeling of Activations in SPM Using a Macroscopic Anatomical Parcellation of the MNI MRI Single-Subject Brain , 2002, NeuroImage.

[30]  G. Deco,et al.  Emerging concepts for the dynamical organization of resting-state activity in the brain , 2010, Nature Reviews Neuroscience.

[31]  Dimitris Samaras,et al.  Deriving reproducible biomarkers from multi-site resting-state data: An Autism-based example , 2016, NeuroImage.

[32]  Dezhong Yao,et al.  Separated channel convolutional neural network to realize the training free motor imagery BCI systems , 2019, Biomed. Signal Process. Control..

[33]  Guigang Zhang,et al.  Deep Learning , 2016, Int. J. Semantic Comput..

[34]  Jimmy Ba,et al.  Adam: A Method for Stochastic Optimization , 2014, ICLR.

[35]  Eduardo Alonso,et al.  FCNet: A Convolutional Neural Network for Calculating Functional Connectivity from Functional MRI , 2017, CNI@MICCAI.

[36]  Yoshua Bengio,et al.  Attention-Based Models for Speech Recognition , 2015, NIPS.

[37]  Chunyan Miao,et al.  3D CNN Based Automatic Diagnosis of Attention Deficit Hyperactivity Disorder Using Functional and Structural MRI , 2017, IEEE Access.

[38]  Lukasz Kaiser,et al.  Attention is All you Need , 2017, NIPS.

[39]  Yoshua Bengio,et al.  Understanding the difficulty of training deep feedforward neural networks , 2010, AISTATS.

[40]  Daniel S. Margulies,et al.  The Neuro Bureau ADHD-200 Preprocessed repository , 2016, NeuroImage.

[41]  Muhammad Asad,et al.  Deep fMRI: AN end-to-end deep network for classification of fMRI data , 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018).

[42]  A. Franco,et al.  NeuroImage: Clinical , 2022 .