Bayesian Geostatistical Analysis and Ecoclimatic Determinants of Corynebacterium pseudotuberculosis Infection among Horses

Kansas witnessed an unprecedented outbreak in Corynebacterium pseudotuberculosis infection among horses, a disease commonly referred to as pigeon fever during fall 2012. Bayesian geostatistical models were developed to identify key environmental and climatic risk factors associated with C. pseudotuberculosis infection in horses. Positive infection status among horses (cases) was determined by positive test results for characteristic abscess formation, positive bacterial culture on purulent material obtained from a lanced abscess (n = 82), or positive serologic evidence of exposure to organism (≥1:512)(n = 11). Horses negative for these tests (n = 172)(controls) were considered free of infection. Information pertaining to horse demographics and stabled location were obtained through review of medical records and/or contact with horse owners via telephone. Covariate information for environmental and climatic determinants were obtained from USDA (soil attributes), USGS (land use/land cover), and NASA MODIS and NASA Prediction of Worldwide Renewable Resources (climate). Candidate covariates were screened using univariate regression models followed by Bayesian geostatistical models with and without covariates. The best performing model indicated a protective effect for higher soil moisture content (OR = 0.53, 95% CrI = 0.25, 0.71), and detrimental effects for higher land surface temperature (≥35°C) (OR = 2.81, 95% CrI = 2.21, 3.85) and habitat fragmentation (OR = 1.31, 95% CrI = 1.27, 2.22) for C. pseudotuberculosis infection status in horses, while age, gender and breed had no effect. Preventative and ecoclimatic significance of these findings are discussed.

[1]  Andrew B. Lawson,et al.  Bayesian Disease Mapping: Hierarchical Modeling in Spatial Epidemiology , 2008 .

[2]  H. Henry Soil extracellular enzyme dynamics in a changing climate , 2012 .

[3]  K. Rood,et al.  Abscesses in Captive Elk Associated with Corynebacterium pseudotuberculosis, Utah, USA , 2012, Journal of wildlife diseases.

[4]  R. G. Davies,et al.  Methods to account for spatial autocorrelation in the analysis of species distributional data : a review , 2007 .

[5]  T. Carpenter,et al.  Use of a real-time polymerase chain reaction-based fluorogenic 5' nuclease assay to evaluate insect vectors of Corynebacterium pseudotuberculosis infections in horses. , 2004, American journal of veterinary research.

[6]  W. D. Wilson,et al.  Corynebacterium pseudotuberculosis infection in horses: 538 cases (1982-1993). , 1996, Journal of the American Veterinary Medical Association.

[7]  Orlando P. Zacarias,et al.  Spatial and temporal patterns of malaria incidence in Mozambique , 2011, Malaria Journal.

[8]  Keith Ord,et al.  Testing for Spatial Autocorrelation Among Regression Residuals , 2010 .

[9]  M. Hoerling,et al.  Causes and Predictability of the 2012 Great Plains Drought , 2014 .

[10]  S. Spier,et al.  Survival of Corynebacterium pseudotuberculosis biovar equi in soil , 2012, Veterinary Record.

[11]  I. Gardner,et al.  Use of antibody titers measured via serum synergistic hemolysis inhibition testing to predict internal Corynebacterium pseudotuberculosis infection in horses. , 2013, Journal of the American Veterinary Medical Association.

[12]  R. Ostfeld,et al.  BIODIVERSITY AND THE DILUTION EFFECT IN DISEASE ECOLOGY , 2001 .

[13]  D. Hosmer,et al.  Model‐Building Strategies and Methods for Logistic Regression , 2005 .

[14]  H. Shaffer,et al.  Annual review of ecology, evolution, and systematics , 2003 .

[15]  Chris Chatfield,et al.  Statistical Methods for Spatial Data Analysis , 2004 .

[16]  B. McCluskey,et al.  Corynebacterium pseudotuberculosis infections (Pigeon Fever) in horses in Western Colorado: An epidemiological investigation , 2001 .

[17]  J. Moore-Kucera,et al.  Soil enzyme activities during the 2011 Texas record drought/heat wave and implications to biogeochemical cycling and organic matter dynamics , 2014 .

[18]  R. Ivanek,et al.  Re-emergence of Pigeon Fever (Corynebacterium pseudotuberculosis) Infection in Texas Horses: Epidemiologic Investigation of Laboratory-Diagnosed Cases , 2014 .

[19]  J. Kinyon,et al.  Isolation of Corynebacterium pseudotuberculosis Biovar equi from a Horse in Central Iowa , 2014 .

[20]  W. D. Wilson,et al.  Evaluation of clinical characteristics, diagnostic test results, and outcome in horses with internal infection caused by Corynebacterium pseudotuberculosis: 30 cases (1995-2003). , 2005, Journal of the American Veterinary Medical Association.

[21]  Jeffrey W. White,et al.  Evaluation of NASA satellite- and assimilation model-derived long-term daily temperature data over the continental US , 2008 .

[22]  T. Hernández,et al.  Severe drought conditions modify the microbial community structure, size and activity in amended and unamended soils , 2012 .

[23]  Christopher A. Barnes,et al.  Completion of the 2006 National Land Cover Database for the conterminous United States. , 2011 .

[24]  J. Willis,et al.  Meridional overturning circulation and heat transport observations in the Atlantic Ocean [in 'state of the Climate in 2012'] , 2013 .

[25]  L. Fahrig Effects of Habitat Fragmentation on Biodiversity , 2003 .

[26]  Benjamin A Lipsky,et al.  Infections caused by nondiphtheria corynebacteria. , 1982, Reviews of infectious diseases.

[27]  N. Cohen,et al.  Frequency of Corynebacterium pseudotuberculosis infection in horses across the United States during a 10-year period. , 2014, Journal of the American Veterinary Medical Association.

[28]  W. D. Wilson,et al.  Risk factors associated with Corynebacterium pseudotuberculosis infection in California horses. , 1998, Preventive veterinary medicine.

[29]  David B. Dunson,et al.  Bayesian Data Analysis , 2010 .

[30]  D B Dunson,et al.  Commentary: practical advantages of Bayesian analysis of epidemiologic data. , 2001, American journal of epidemiology.

[31]  R D Holt,et al.  Diverse and Contrasting Effects of Habitat Fragmentation , 1992, Science.

[32]  M. Vayssier-Taussat,et al.  Ecological Factors Characterizing the Prevalence of Bacterial Tick-Borne Pathogens in Ixodes ricinus Ticks in Pastures and Woodlands , 2010, Applied and Environmental Microbiology.

[33]  J. Belnap,et al.  Responses of wind erosion to climate-induced vegetation changes on the Colorado Plateau , 2011, Proceedings of the National Academy of Sciences.

[34]  Sw. Banerjee,et al.  Hierarchical Modeling and Analysis for Spatial Data , 2003 .