VARSPLIC: alternatively-spliced protein sequences derived from SWISS-PROT and TrEMBL
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The program varsplic.pl uses information present in the SWISS-PROT and TrEMBL databases to create new records for alternatively spliced isoforms. These new records can be used in similarity searches.
AVAILABILITY
The program is available at ftp://ftp.ebi.ac.uk/pub/software/swissprot/, together with regularly updated output files.
CONTACT
pkersey@ebi.ac.uk
[1] Rolf Apweiler,et al. The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000 , 2000, Nucleic Acids Res..
[2] Rolf Apweiler,et al. Swissknife - 'lazy parsing' of SWISS-PROT entries , 1999, Bioinform..