Role of Rodent Secondary Motor Cortex in Value-based Action Selection Nih Public Access Author Manuscript

[1]  M. Wiles,et al.  Mouse Estrous Cycle Identification Tool and Images , 2012, PloS one.

[2]  Cole Trapnell,et al.  Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. , 2010, Nature biotechnology.

[3]  W. Huber,et al.  which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. MAnorm: a robust model for quantitative comparison of ChIP-Seq data sets , 2011 .

[4]  Colin N. Dewey,et al.  RNA-Seq gene expression estimation with read mapping uncertainty , 2009, Bioinform..

[5]  Sandrine Dudoit,et al.  Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments , 2010, BMC Bioinformatics.

[6]  Wing Hung Wong,et al.  Identifiability of isoform deconvolution from junction arrays and RNA-Seq , 2009, Bioinform..

[7]  A. Mortazavi,et al.  Computation for ChIP-seq and RNA-seq studies , 2009, Nature Methods.

[8]  P. Tam Faculty Opinions recommendation of miR-145 and miR-143 regulate smooth muscle cell fate and plasticity. , 2009 .

[9]  C. Caligioni Assessing Reproductive Status/Stages in Mice , 2009, Current protocols in neuroscience.

[10]  Gonçalo R. Abecasis,et al.  The Sequence Alignment/Map format and SAMtools , 2009, Bioinform..

[11]  Wing Hung Wong,et al.  Statistical inferences for isoform expression in RNA-Seq , 2009, Bioinform..

[12]  Lior Pachter,et al.  Sequence Analysis , 2020, Definitions.

[13]  Michael F. Lin,et al.  Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals , 2009, Nature.

[14]  Lee T. Sam,et al.  Transcriptome Sequencing to Detect Gene Fusions in Cancer , 2009, Nature.

[15]  Cole Trapnell,et al.  Ultrafast and memory-efficient alignment of short DNA sequences to the human genome , 2009, Genome Biology.

[16]  F. Denoeud,et al.  Annotating genomes with massive-scale RNA sequencing , 2008, Genome Biology.

[17]  Eric T. Wang,et al.  Alternative Isoform Regulation in Human Tissue Transcriptomes , 2008, Nature.

[18]  M. Stephens,et al.  RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays. , 2008, Genome research.

[19]  B. Williams,et al.  Mapping and quantifying mammalian transcriptomes by RNA-Seq , 2008, Nature Methods.

[20]  M. Gerstein,et al.  The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing , 2008, Science.

[21]  S. Ranade,et al.  Stem cell transcriptome profiling via massive-scale mRNA sequencing , 2008, Nature Methods.

[22]  Lior Pachter,et al.  Viral Population Estimation Using Pyrosequencing , 2007, PLoS Comput. Biol..

[23]  A. Mortazavi,et al.  Genome-Wide Mapping of in Vivo Protein-DNA Interactions , 2007, Science.

[24]  Susan S. Brown,et al.  FHL3 binds MyoD and negatively regulates myotube formation , 2007, Journal of Cell Science.

[25]  S. Brenner,et al.  Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements , 2007, Nature.

[26]  S. Tapscott,et al.  The circuitry of a master switch: Myod and the regulation of skeletal muscle gene transcription , 2005, Development.

[27]  Stephen M. Mount,et al.  Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies. , 2003, Nucleic acids research.

[28]  B. Wold,et al.  Skeletal muscle determination and differentiation: story of a core regulatory network and its context. , 1996, Current opinion in cell biology.

[29]  B. Nadal-Ginard,et al.  Transcriptional and posttranscriptional control of c-myc during myogenesis: its mRNA remains inducible in differentiated cells and does not suppress the differentiated phenotype , 1986, Molecular and cellular biology.

[30]  D. Yaffe,et al.  A myogenic cell line with altered serum requirements for differentiation. , 1977, Differentiation; research in biological diversity.

[31]  R. P. Dilworth,et al.  A DECOMPOSITION THEOREM FOR PARTIALLY ORDERED SETS , 1950 .