A Hybrid Convolutional and Recurrent Deep Neural Network for Breast Cancer Pathological Image Classification

Hematoxylin and Eosin H&E stained breast tissue samples from biopsies are observed under microscopy for the gold standard diagnosis of breast cancer. However, a substantial workload increases and the complexity of the pathological images make this task time-consuming and may suffer from pathologist’s subjectivity. Facing this problem, the development of automatic and precise diagnosis methods is challenging but also essential for the field. In this paper, we propose a new hybrid convolutional and recurrent deep neural network for breast cancer pathological image classification. Our method considers the short-term as well as the long-term spatial correlations between patches through RNN which is directly incorporated on top of a CNN feature extractor. Experimental results showed that our method obtained an average accuracy of 90.5% for 4-class classification task, which outperforms the state-of-the-art method. At the same time, we release a bigger dataset with 1568 breast cancer pathological images to the scientific community, which are now publicly available from http://ear.ict.ac.cn/?page id=1576. In particular, our dataset covers as many different subclasses spanning different age groups as possible, thus alleviating the problem of relatively low classification accuracy of benign.

[1]  Joel H. Saltz,et al.  Patch-Based Convolutional Neural Network for Whole Slide Tissue Image Classification , 2015, 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[2]  Juho Kannala,et al.  Deep learning for magnification independent breast cancer histopathology image classification , 2016, 2016 23rd International Conference on Pattern Recognition (ICPR).

[3]  Bailing Zhang,et al.  Breast cancer diagnosis from biopsy images by serial fusion of Random Subspace ensembles , 2011, 2011 4th International Conference on Biomedical Engineering and Informatics (BMEI).

[4]  Amit Sethi,et al.  Classification of Breast Cancer Histology using Deep Learning , 2018, ICIAR.

[5]  B. Yener,et al.  Cell-Graph Mining for Breast Tissue Modeling and Classification , 2007, 2007 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[6]  Sergey Ioffe,et al.  Rethinking the Inception Architecture for Computer Vision , 2015, 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[7]  Luiz Eduardo Soares de Oliveira,et al.  Breast cancer histopathological image classification using Convolutional Neural Networks , 2016, 2016 International Joint Conference on Neural Networks (IJCNN).

[8]  Michael S. Bernstein,et al.  ImageNet Large Scale Visual Recognition Challenge , 2014, International Journal of Computer Vision.

[9]  Xiaohui Xie,et al.  Deep Learning Framework for Multi-class Breast Cancer Histology Image Classification , 2018, ICIAR.

[10]  J. S. Marron,et al.  A method for normalizing histology slides for quantitative analysis , 2009, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

[11]  Anant Madabhushi,et al.  Automated grading of breast cancer histopathology using spectral clustering with textural and architectural image features , 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

[12]  A. Ruifrok,et al.  Quantification of histochemical staining by color deconvolution. , 2001, Analytical and quantitative cytology and histology.

[13]  Alexander Rakhlin,et al.  Deep Convolutional Neural Networks for Breast Cancer Histology Image Analysis , 2018, bioRxiv.

[14]  Robert Sabourin,et al.  Improve the performance of transfer learning without fine-tuning using dissimilarity-based multi-view learning for breast cancer histology images , 2018, ICIAR.

[15]  Guigang Zhang,et al.  Deep Learning , 2016, Int. J. Semantic Comput..

[16]  Geoffrey E. Hinton,et al.  Visualizing Data using t-SNE , 2008 .

[17]  Max A. Viergever,et al.  Breast Cancer Histopathology Image Analysis: A Review , 2014, IEEE Transactions on Biomedical Engineering.

[18]  Jürgen Schmidhuber,et al.  Long Short-Term Memory , 1997, Neural Computation.

[19]  Khurram Khurshid,et al.  Classification of Breast Cancer Histology Images Using Transfer Learning , 2019, 2019 16th International Bhurban Conference on Applied Sciences and Technology (IBCAST).

[20]  Catarina Eloy,et al.  Classification of breast cancer histology images using Convolutional Neural Networks , 2017, PloS one.

[21]  Ron Kimmel,et al.  Breast Cancer Diagnosis From Biopsy Images Using Generic Features and SVMs , 2006 .

[22]  Bram van Ginneken,et al.  A survey on deep learning in medical image analysis , 2017, Medical Image Anal..

[23]  Nasir M. Rajpoot,et al.  Context-Aware Learning using Transferable Features for Classification of Breast Cancer Histology Images , 2018, ICIAR.