Identification of candidate genes involved in wax deposition in Poa pratensis by RNA-seq

[1]  A. Fishman,et al.  Variation in quantity and composition of cuticular hydrocarbons in the scorpion Buthus occitanus (Buthidae) in response to acute exposure to desiccation stress. , 2015, Comparative biochemistry and physiology. Part A, Molecular & integrative physiology.

[2]  Jiana Li,et al.  Changes of epicuticular wax induced by enhanced UV-B radiation impact on gas exchange in Brassica napus , 2014, Acta Physiologiae Plantarum.

[3]  C. Ober,et al.  Mutation for Nonsyndromic Mental Retardation in the trans-2-Enoyl-CoA Reductase TER Gene Involved in Fatty Acid Elongation Impairs the Enzyme Activity and Stability, Leading to Change in Sphingolipid Profile* , 2013, The Journal of Biological Chemistry.

[4]  J. Benayas,et al.  Poa pratensis L., current status of the longest-established non-native vascular plant in the Antarctic , 2013, Polar Biology.

[5]  J. Napier,et al.  Reconstitution of Plant Alkane Biosynthesis in Yeast Demonstrates That Arabidopsis ECERIFERUM1 and ECERIFERUM3 Are Core Components of a Very-Long-Chain Alkane Synthesis Complex[C][W] , 2012, Plant Cell.

[6]  Yuhong Tang,et al.  Loss of Abaxial Leaf Epicuticular Wax in Medicago truncatula irg1/palm1 Mutants Results in Reduced Spore Differentiation of Anthracnose and Nonhost Rust Pathogens[W] , 2012, Plant Cell.

[7]  Colin N. Dewey,et al.  RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome , 2011, BMC Bioinformatics.

[8]  N. Friedman,et al.  Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data , 2011, Nature Biotechnology.

[9]  Pil Joon Seo,et al.  The MYB96 Transcription Factor Regulates Cuticular Wax Biosynthesis under Drought Conditions in Arabidopsis[W] , 2011, Plant Cell.

[10]  Chung-Mo Park,et al.  MYB96-mediated abscisic acid signals induce pathogen resistance response by promoting salicylic acid biosynthesis in Arabidopsis. , 2010, The New phytologist.

[11]  A. González,et al.  Effect of terminal water stress on leaf epicuticular wax load, residual transpiration and grain yield in barley , 2010, Euphytica.

[12]  W. Huber,et al.  which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. MAnorm: a robust model for quantitative comparison of ChIP-Seq data sets , 2011 .

[13]  D. Kosma,et al.  Arabidopsis CER8 encodes LONG-CHAIN ACYL-COA SYNTHETASE 1 (LACS1) that has overlapping functions with LACS2 in plant wax and cutin synthesis. , 2009, The Plant journal : for cell and molecular biology.

[14]  Cole Trapnell,et al.  Ultrafast and memory-efficient alignment of short DNA sequences to the human genome , 2009, Genome Biology.

[15]  Ruth C. Martin,et al.  Evaluation of reference genes for quantitative RT-PCR in Lolium temulentum under abiotic stress , 2009 .

[16]  R. Jetter,et al.  Identification of the Wax Ester Synthase/Acyl-Coenzyme A:Diacylglycerol Acyltransferase WSD1 Required for Stem Wax Ester Biosynthesis in Arabidopsis12[W][OA] , 2008, Plant Physiology.

[17]  B. Williams,et al.  Mapping and quantifying mammalian transcriptomes by RNA-Seq , 2008, Nature Methods.

[18]  P. A. Rea,et al.  Plant ABC proteins--a unified nomenclature and updated inventory. , 2008, Trends in plant science.

[19]  D. Roby,et al.  A MYB Transcription Factor Regulates Very-Long-Chain Fatty Acid Biosynthesis for Activation of the Hypersensitive Cell Death Response in Arabidopsis[W][OA] , 2008, The Plant Cell Online.

[20]  C. Jeffree,et al.  The Fine Structure of the Plant Cuticle , 2007 .

[21]  J. Chory,et al.  The Arabidopsis DESPERADO/AtWBC11 Transporter Is Required for Cutin and Wax Secretion1[C][W] , 2007, Plant Physiology.

[22]  R. Jetter,et al.  The Cytochrome P450 Enzyme CYP96A15 Is the Midchain Alkane Hydroxylase Responsible for Formation of Secondary Alcohols and Ketones in Stem Cuticular Wax of Arabidopsis1[W][OA] , 2007, Plant Physiology.

[23]  M. Jenks,et al.  Changes in leaf cuticular waxes of sesame (Sesamum indicum L.) plants exposed to water deficit. , 2007, Journal of plant physiology.

[24]  R. Jetter,et al.  Characterization of Arabidopsis ABCG11/WBC11, an ATP binding cassette (ABC) transporter that is required for cuticular lipid secretion. , 2007, The Plant journal : for cell and molecular biology.

[25]  L. Schreiber,et al.  Cloning and expression analysis of candidate genes involved in wax deposition along the growing barley (Hordeum vulgare) leaf , 2007, Planta.

[26]  L. Schreiber,et al.  Cuticular permeance in relation to wax and cutin development along the growing barley (Hordeum vulgare) leaf , 2007, Planta.

[27]  Teresa Penfield,et al.  The Transcription Factor WIN1/SHN1 Regulates Cutin Biosynthesis in Arabidopsis thaliana[W] , 2007, The Plant Cell Online.

[28]  B. Garbay,et al.  Low level of pathogenesis-related protein 1 mRNA expression in 15-day-old Arabidopsis cer6-2 and cer2 eceriferum mutants , 2007 .

[29]  R. Jetter,et al.  CER4 Encodes an Alcohol-Forming Fatty Acyl-Coenzyme A Reductase Involved in Cuticular Wax Production in Arabidopsis1[W] , 2006, Plant Physiology.

[30]  T. Shepherd,et al.  The effects of stress on plant cuticular waxes. , 2006, The New phytologist.

[31]  W. Barthlott,et al.  Influences of air humidity during the cultivation of plants on wax chemical composition, morphology and leaf surface wettability , 2006 .

[32]  Markus Riederer,et al.  Biology of the plant cuticle , 2006 .

[33]  Juan F Medrano,et al.  Real-time PCR for mRNA quantitation. , 2005, BioTechniques.

[34]  L. Schreiber,et al.  Cuticular wax deposition in growing barley (Hordeum vulgare) leaves commences in relation to the point of emergence of epidermal cells from the sheaths of older leaves , 2005, Planta.

[35]  Christel Garcia,et al.  Profiling candidate genes involved in wax biosynthesis in Arabidopsis thaliana by microarray analysis. , 2005, Biochimica et biophysica acta.

[36]  Huanquan Zheng,et al.  Disruptions of the Arabidopsis Enoyl-CoA Reductase Gene Reveal an Essential Role for Very-Long-Chain Fatty Acid Synthesis in Cell Expansion during Plant Morphogenesis , 2005, The Plant Cell Online.

[37]  R. Jetter,et al.  Plant Cuticular Lipid Export Requires an ABC Transporter , 2004, Science.

[38]  A. Aharoni,et al.  The SHINE Clade of AP2 Domain Transcription Factors Activates Wax Biosynthesis, Alters Cuticle Properties, and Confers Drought Tolerance when Overexpressed in Arabidopsis w⃞ , 2004, The Plant Cell Online.

[39]  Cai-Zhong Jiang,et al.  WIN1, a transcriptional activator of epidermal wax accumulation in Arabidopsis. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[40]  Robert L. Fischer,et al.  Alterations in CER6, a Gene Identical to CUT1, Differentially Affect Long-Chain Lipid Content on the Surface of Pollen and Stems , 2000, Plant Cell.

[41]  J. Rozema,et al.  Leaf waxes of slow-growing alpine and fast-growing lowland Poa species: inherent differences and responses to UV-B radiation , 1999 .

[42]  Rhee,et al.  Epicuticular wax accumulation and fatty acid elongation activities are induced during leaf development of leeks , 1998, Plant physiology.

[43]  L. Kunst,et al.  Very-long-chain fatty acid biosynthesis is controlled through the expression and specificity of the condensing enzyme. , 1997, The Plant journal : for cell and molecular biology.

[44]  J. Kader.  LIPID-TRANSFER PROTEINS IN PLANTS. , 1996, Annual review of plant physiology and plant molecular biology.

[45]  Dusty Post-Beittenmiller,et al.  BIOCHEMISTRY AND MOLECULAR BIOLOGY OF WAX PRODUCTION IN PLANTS. , 1996, Annual review of plant physiology and plant molecular biology.

[46]  H. Olff,et al.  Plant Competition in Relation to Neighbor Biomass: An Intercontinental Study with POA Pratensis , 1994, Ecology.

[47]  J. Grace,et al.  Effects of wind and abrasion on cuticular integrity in Fagus sylvatica L. and consequences for transfer of pollutants through leaf surfaces , 1992 .

[48]  M. Koornneef,et al.  A Genetic and Phenotypic Description of Eceriferum (cer) Mutants in Arabidopsis thaliana , 1989 .

[49]  A. Aharoni,et al.  The transcription factor SlSHINE3 modulates defense responses in tomato plants , 2013, Plant Molecular Biology.

[50]  G. Ingram,et al.  Epidermis: the formation and functions of a fundamental plant tissue. , 2011, The New phytologist.

[51]  Fabio Fiorani,et al.  Kinematic analysis of cell division and expansion. , 2010, Methods in molecular biology.

[52]  Susumu Goto,et al.  The KEGG resource for deciphering the genome , 2004, Nucleic Acids Res..

[53]  Michael Y. Galperin,et al.  The COG database: a tool for genome-scale analysis of protein functions and evolution , 2000, Nucleic Acids Res..