Frequentist operating characteristics of Bayesian optimal designs via simulation

Bayesian adaptive designs have become popular because of the possibility of increasing the number of patients treated with more beneficial treatments, while still providing sufficient evidence for treatment efficacy comparisons. It can be essential, for regulatory and other purposes, to conduct frequentist analyses both before and after a Bayesian adaptive trial, and these remain challenging. In this paper, we propose a general simulation-based approach to compare frequentist designs with Bayesian adaptive designs based on frequentist criteria such as power and to compute valid frequentist p-values. We illustrate our approach by comparing the power of an equal randomization (ER) design with that of an optimal Bayesian adaptive (OBA) design. The Bayesian design considered here is the dynamic programming solution of the optimization of a specific utility function defined by the number of successes in a patient horizon, including patients whose treatment will be affected by the trial's results after the end of the trial. While the power of an ER design depends on treatment efficacy and the sample size, the power of the OBA design also depends on the patient horizon size. Our results quantify the trade-off between power and the optimal assignment of patients to treatments within the trial. We show that, for large patient horizons, the two criteria are in agreement, while for small horizons, differences can be substantial. This has implications for precision medicine, where patient horizons are decreasing as a result of increasing stratification of patients into subpopulations defined by molecular markers.

[1]  D. Faries,et al.  A randomized play-the-winner design for multi-arm clinical trials , 1994 .

[2]  Lorenzo Trippa,et al.  Combining Bayesian experimental designs and frequentist data analyses: motivations and examples , 2017 .

[3]  Lorenzo Trippa,et al.  Bayesian designs and the control of frequentist characteristics: A practical solution , 2015, Biometrics.

[4]  L D Fisher,et al.  The use of one-sided tests in drug trials: an FDA advisory committee member's perspective. , 1991, Journal of biopharmaceutical statistics.

[5]  L. J. Wei,et al.  Exact two-sample permutation tests based on the randomized play-the-winner rule , 1988 .

[6]  Angela J. Yu,et al.  Should I stay or should I go? How the human brain manages the trade-off between exploitation and exploration , 2007, Philosophical Transactions of the Royal Society B: Biological Sciences.

[7]  G. Yin,et al.  Worth Adapting? Revisiting the Usefulness of Outcome-Adaptive Randomization , 2012, Clinical Cancer Research.

[8]  William F. Rosenberger,et al.  Optimality, Variability, Power , 2003 .

[9]  Lorenzo Trippa,et al.  A Bayesian response-adaptive trial in tuberculosis: The endTB trial , 2017, Clinical trials.

[10]  Haolun Shi,et al.  Bayesian randomized clinical trials: From fixed to adaptive design. , 2017, Contemporary clinical trials.

[11]  Jack Bowden,et al.  Unbiased estimation for response adaptive clinical trials , 2015, Statistical methods in medical research.

[12]  Lorenzo Trippa,et al.  Bayesian response‐adaptive designs for basket trials , 2017, Biometrics.

[13]  Donald A. Berry,et al.  Optimal adaptive randomized designs for clinical trials , 2007 .

[14]  David J. Spiegelhalter,et al.  Bayesian Approaches to Randomized Trials , 1994, Bayesian Biostatistics.

[15]  D A Berry,et al.  A case for Bayesianism in clinical trials. , 1993, Statistics in medicine.

[16]  J. Berger The case for objective Bayesian analysis , 2006 .

[17]  S. Dubey,et al.  Some thoughts on the one-sided and two-sided tests. , 1991, Journal of biopharmaceutical statistics.

[18]  J. Wason,et al.  A comparison of Bayesian adaptive randomization and multi‐stage designs for multi‐arm clinical trials , 2014, Statistics in medicine.

[19]  Ralph B. D'Agostino,et al.  The Appropriateness of Some Common Procedures for Testing the Equality of Two Independent Binomial Populations , 1988 .

[20]  T. Colton A Model for Selecting One of Two Medical Treatments , 1963 .

[21]  M. Zelen,et al.  Play the Winner Rule and the Controlled Clinical Trial , 1969 .

[22]  Valerie L Durkalski,et al.  Clinical trialist perspectives on the ethics of adaptive clinical trials: a mixed-methods analysis , 2015, BMC medical ethics.

[23]  K E Peace,et al.  One-sided or two-sided p values: which most appropriately address the question of drug efficacy? , 1991, Journal of biopharmaceutical statistics.

[24]  Donald A. Berry,et al.  Relationship Between Bayesian and Frequentist Sample Size Determination , 2005 .

[25]  G. J. G. Upton,et al.  The importance of the patient horizon in the sequential analysis of binomial clinical trials , 1976 .

[26]  J E Overall,et al.  A comment concerning one-sided tests of significance in new drug applications. , 1991, Journal of biopharmaceutical statistics.

[27]  L. J. Wei,et al.  The Randomized Play-the-Winner Rule in Medical Trials , 1978 .

[28]  P. Thall,et al.  Practical Bayesian adaptive randomisation in clinical trials. , 2007, European journal of cancer.

[29]  J Jack Lee,et al.  Comparing three regularization methods to avoid extreme allocation probability in response-adaptive randomization , 2018, Journal of biopharmaceutical statistics.

[30]  Lorenzo Trippa,et al.  Bayesian Uncertainty Directed Trial Designs , 2018, Journal of the American Statistical Association.

[31]  Jonathan J Shuster,et al.  How conservative is Fisher's exact test? A quantitative evaluation of the two‐sample comparative binomial trial , 2008, Statistics in medicine.

[32]  J. Ware,et al.  Extracorporeal circulation in neonatal respiratory failure: a prospective randomized study. , 1985, Pediatrics.

[33]  D. Berry,et al.  Adaptive assignment versus balanced randomization in clinical trials: a decision analysis. , 1995, Statistics in medicine.

[34]  Lorenzo Trippa,et al.  Optimal Bayesian adaptive trials when treatment efficacy depends on biomarkers , 2016, Biometrics.

[35]  G. Parmigiani,et al.  Bayesian adaptive randomized trial design for patients with recurrent glioblastoma. , 2012, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

[36]  Lorenzo Trippa,et al.  Adding experimental arms to platform clinical trials: randomization procedures and interim analyses. , 2018, Biostatistics.

[37]  Fei Jiang,et al.  A Bayesian decision‐theoretic sequential response‐adaptive randomization design , 2013, Statistics in medicine.

[38]  Boris Freidlin,et al.  Design issues in randomized phase II/III trials. , 2012, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

[39]  J Jack Lee,et al.  A simulation study for comparing testing statistics in response-adaptive randomization , 2010, BMC medical research methodology.