Identification of Optimum Panel of Blood-based Biomarkers for Alzheimer’s Disease Diagnosis Using Machine Learning

With the increasing number of people living with Alzheimer’s disease (AD), there is a need for low-cost and easy to use methods to detect AD early to facilitate access to appropriate care pathways. Neuroimaging biomarkers (such as those based on PET and MRI) and biochemical biomarkers (such as those based on CSF) are recommended by international guidelines to facilitate diagnosis. However, neuroimaging is expensive and may not be widely available and CSF testing is invasive. Bloodbased biomarkers offer the potential for the development of a low-cost and more time efficient tool to detect AD to complement CSF and neuroimaging as blood is much easier to obtain. Although no single blood biomarker is yet able to detect AD, combinations of biomarkers (also called panels) have shown good results. However, a large number of biomarkers are often needed to achieve a satisfactory detection performance. In addition, it is difficult to reproduce reported results within and across different study cohorts because of data overfitting and lack of access to the datasets used in the studies. In this study, our focus is to identify an optimum panel (in terms of the least number of blood biomarkers to meet the specified diagnostic performance of 80% sensitivity and specificity) based on a widely accessible data set, and to demonstrate a testing methodology that reinforces reproducibility of results. Realizing a panel with reduced number of markers will have significant impact on the complexity and cost of diagnosis and potential development of cost-effective point of care devices.

[1]  Giovanni B. Frisoni,et al.  Consensus report of the working group on: 'Molecular and biochemical markers of Alzheimer's disease' , 1998 .

[2]  Deborah Pinchev,et al.  Mining biomarkers in human sera using proteomic tools , 2004, Proteomics.

[3]  Antonio Cerasa,et al.  Random Forest Algorithm for the Classification of Neuroimaging Data in Alzheimer's Disease: A Systematic Review , 2017, Front. Aging Neurosci..

[4]  D. DeMets,et al.  Biomarkers and surrogate endpoints: Preferred definitions and conceptual framework , 2001, Clinical pharmacology and therapeutics.

[5]  P. Scheltens,et al.  Research criteria for the diagnosis of Alzheimer's disease: revising the NINCDS–ADRDA criteria , 2007, The Lancet Neurology.

[6]  Timothy J. Hohman,et al.  Alpha-2 macroglobulin in Alzheimer’s disease: a marker of neuronal injury through the RCAN1 pathway , 2017, Molecular Psychiatry.

[7]  M. Albert,et al.  Alpha-2 macroglobulin in Alzheimer ' s disease : a marker of neuronal injury through the RCAN 1 pathway , 2022 .

[8]  Walter J Koroshetz,et al.  Plasma biomarkers associated with the apolipoprotein E genotype and Alzheimer disease. , 2012, Archives of neurology.

[9]  Luca Cucullo,et al.  Blood-Brain Barrier Damage Induces Release of α2-Macroglobulin* , 2003, Molecular & Cellular Proteomics.

[10]  Denise C. Park,et al.  Toward defining the preclinical stages of Alzheimer’s disease: Recommendations from the National Institute on Aging-Alzheimer's Association workgroups on diagnostic guidelines for Alzheimer's disease , 2011, Alzheimer's & Dementia.

[11]  Nick C Fox,et al.  Advancing research diagnostic criteria for Alzheimer's disease: the IWG-2 criteria , 2014, The Lancet Neurology.

[12]  Ricardo Nitrini,et al.  Support vector machine-based classification of neuroimages in Alzheimer’s disease: direct comparison of FDG-PET, rCBF-SPECT and MRI data acquired from the same individuals , 2017, Revista brasileira de psiquiatria.

[13]  Yi Zhang,et al.  Plasma Biomarkers of Brain Atrophy in Alzheimer's Disease , 2011, PloS one.

[14]  Juan Manuel Górriz,et al.  Computer-aided diagnosis of Alzheimer's type dementia combining support vector machines and discriminant set of features , 2013, Inf. Sci..

[15]  R. Tibshirani,et al.  Classification and prediction of clinical Alzheimer's diagnosis based on plasma signaling proteins , 2007, Nature Medicine.

[16]  Guanghua Xiao,et al.  A Blood-Based Screening Tool for Alzheimer's Disease That Spans Serum and Plasma: Findings from TARC and ADNI , 2011, PloS one.

[17]  B. Langlois,et al.  Advances in tenascin-C biology , 2011, Cellular and Molecular Life Sciences.

[18]  Viswanath Devanarayan,et al.  Evaluation of Plasma Proteomic Data for Alzheimer Disease State Classification and for the Prediction of Progression From Mild Cognitive Impairment to Alzheimer Disease , 2013, Alzheimer disease and associated disorders.

[19]  Alzheimer’s Association 2017 Alzheimer's disease facts and figures , 2017, Alzheimer's & Dementia.

[20]  Justin Bedo,et al.  Blood-based protein biomarkers for diagnosis of Alzheimer disease. , 2012, Archives of neurology.

[21]  Hongyue Dai,et al.  A candidate plasma protein classifier to identify Alzheimer's disease. , 2014, Journal of Alzheimer's disease : JAD.

[22]  U. Schreiter-Gasser,et al.  Interleukin‐6 and α‐2‐macroglobulin indicate an acute‐phase state in Alzheimer's disease cortices , 1991, FEBS letters.

[23]  Magda Tsolaki,et al.  Plasma Based Markers of [11C] PiB-PET Brain Amyloid Burden , 2012, PloS one.

[24]  R. Dobson,et al.  Blood Protein Markers of Neocortical Amyloid-β Burden: A Candidate Study Using SOMAscan Technology , 2015, Journal of Alzheimer's disease : JAD.

[25]  M. Albert,et al.  Introduction to the recommendations from the National Institute on Aging-Alzheimer's Association workgroups on diagnostic guidelines for Alzheimer's disease , 2011, Alzheimer's & Dementia.

[26]  Stefan Wagenpfeil,et al.  Plasma Proteomics for the Identification of Alzheimer Disease , 2013, Alzheimer disease and associated disorders.

[27]  Katharina Buerger,et al.  Biological Marker Candidates of Alzheimer's Disease in Blood, Plasma, and Serum , 2009, CNS neuroscience & therapeutics.

[28]  Eileen Daly,et al.  Proteome-based identification of plasma proteins associated with hippocampal metabolism in early Alzheimer’s disease , 2008, Journal of Neurology.

[29]  M. Prince,et al.  World Alzheimer report 2016: improving healthcare for people living with dementia: coverage, quality and costs now and in the future , 2016 .