Two stage residual CNN for texture denoising and structure enhancement on low dose CT image

BACKGROUND AND OBJECTIVE X-ray computed tomography (CT) plays an important role in modern medical science. Human health problems caused by CT radiation have attracted the attention of the academic community widely. Reducing radiation dose results in a deterioration in image quality and further affects doctor's diagnosis. Therefore, this paper introduces a new denoise method for low dose CT (LDCT) images, called two stage residual convolutional neural network (TS-RCNN). METHODS There are two important parts with respect to our network. 1) The first stage RCNN is proposed for texture denoising via the stationary wavelet transform (SWT) and the perceptual loss. Specifically, SWT is performed on each normal dose CT (NDCT) image and generated four wavelet images are considered as the labels. 2) The second stage RCNN is established for structure enhancement via the average NDCT model on the basis of the first network's result. Finally, the denoised CT image is obtained via inverse SWT. RESULTS Our proposed TS-RCNN is trained on three groups of simulated LDCT images in 1123 images per group and evaluated on 129 simulated LDCT images for each group. Besides, to demonstrate the clinical application of TS-RCNN, we also test our method on the 2016 Low Dose CT Grand Challenge dataset. Quantitative results show that TS-RCNN almost achieves the best results in terms of MSE, SSIM and PSNR compared to other methods. CONCLUSIONS The experimental results and comparisons demonstrate that TS-RCNN not only preserves more texture information, but also enhances structural information on LDCT images.

[1]  J. Coatrieux,et al.  Improving abdomen tumor low-dose CT images using a fast dictionary learning based processing , 2013, Physics in medicine and biology.

[2]  Mannudeep K. Kalra,et al.  Low-Dose CT with a Residual Encoder-Decoder Convolutional Neural Network (RED-CNN) , 2017, ArXiv.

[3]  E. Sidky,et al.  Image reconstruction in circular cone-beam computed tomography by constrained, total-variation minimization , 2008, Physics in medicine and biology.

[4]  Yudong Zhang,et al.  Structure-Adaptive Fuzzy Estimation for Random-Valued Impulse Noise Suppression , 2018, IEEE Transactions on Circuits and Systems for Video Technology.

[5]  Karen O. Egiazarian,et al.  Image denoising with block-matching and 3D filtering , 2006, Electronic Imaging.

[6]  Feng Lin,et al.  Low-Dose CT With a Residual Encoder-Decoder Convolutional Neural Network , 2017, IEEE Transactions on Medical Imaging.

[7]  Geoffrey E. Hinton,et al.  ImageNet classification with deep convolutional neural networks , 2012, Commun. ACM.

[8]  M. Elad,et al.  $rm K$-SVD: An Algorithm for Designing Overcomplete Dictionaries for Sparse Representation , 2006, IEEE Transactions on Signal Processing.

[9]  R. Weissleder,et al.  Block matching 3D random noise filtering for absorption optical projection tomography , 2010, Physics in medicine and biology.

[10]  Daniel Kolditz,et al.  Iterative reconstruction methods in X-ray CT. , 2012, Physica medica : PM : an international journal devoted to the applications of physics to medicine and biology : official journal of the Italian Association of Biomedical Physics.

[11]  Li Fei-Fei,et al.  ImageNet: A large-scale hierarchical image database , 2009, CVPR.

[12]  Jeffrey A. Fessler,et al.  Reduced memory augmented Lagrangian algorithm for 3D iterative x-ray CT image reconstruction , 2012, Medical Imaging.

[13]  B. Silverman,et al.  The Stationary Wavelet Transform and some Statistical Applications , 1995 .

[14]  Lei Zhang,et al.  Low-Dose X-ray CT Reconstruction via Dictionary Learning , 2012, IEEE Transactions on Medical Imaging.

[15]  Huazhong Shu,et al.  Artifact Suppressed Dictionary Learning for Low-Dose CT Image Processing , 2014, IEEE Transactions on Medical Imaging.

[16]  Jin Liu,et al.  Deep iterative reconstruction estimation (DIRE): approximate iterative reconstruction estimation for low dose CT imaging , 2019, Physics in medicine and biology.

[17]  Jin Liu,et al.  Discriminative Feature Representation to Improve Projection Data Inconsistency for Low Dose CT Imaging , 2017, IEEE Transactions on Medical Imaging.

[18]  Jimmy Ba,et al.  Adam: A Method for Stochastic Optimization , 2014, ICLR.

[19]  Max A. Viergever,et al.  Generative Adversarial Networks for Noise Reduction in Low-Dose CT , 2017, IEEE Transactions on Medical Imaging.

[20]  Jian Sun,et al.  Deep Residual Learning for Image Recognition , 2015, 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[21]  L. Tanoue Computed Tomography — An Increasing Source of Radiation Exposure , 2009 .

[22]  Jianhua Ma,et al.  Nonlocal Prior Bayesian Tomographic Reconstruction , 2008, Journal of Mathematical Imaging and Vision.

[23]  Jong Chul Ye,et al.  A deep convolutional neural network using directional wavelets for low‐dose X‐ray CT reconstruction , 2016, Medical physics.

[24]  Jiasong Wu,et al.  Improving Low-Dose CT Image Using Residual Convolutional Network , 2017, IEEE Access.

[25]  Amy Berrington de González,et al.  Risk of cancer from diagnostic X-rays: estimates for the UK and 14 other countries , 2004, The Lancet.

[26]  Lei Zhang,et al.  Beyond a Gaussian Denoiser: Residual Learning of Deep CNN for Image Denoising , 2016, IEEE Transactions on Image Processing.

[27]  Piotr J. Slomka,et al.  Image denoising of low-radiation dose coronary CT angiography by an adaptive block-matching 3D algorithm , 2013, Medical Imaging.

[28]  Qianjin Feng,et al.  Low-dose computed tomography image restoration using previous normal-dose scan. , 2011, Medical physics.

[29]  Hervé Carfantan,et al.  Time-invariant orthonormal wavelet representations , 1996, IEEE Trans. Signal Process..

[30]  Xuanqin Mou,et al.  Low-Dose CT Image Denoising Using a Generative Adversarial Network With Wasserstein Distance and Perceptual Loss , 2017, IEEE Transactions on Medical Imaging.

[31]  Andrew Zisserman,et al.  Very Deep Convolutional Networks for Large-Scale Image Recognition , 2014, ICLR.

[32]  Jian Yang,et al.  Sparse-view X-ray CT reconstruction with Gamma regularization , 2017, Neurocomputing.

[33]  D. Donoho,et al.  Translation-Invariant De-Noising , 1995 .

[34]  Vincent Dumoulin,et al.  Deconvolution and Checkerboard Artifacts , 2016 .

[35]  Alvin C. Silva,et al.  Iterative Reconstruction Technique for Reducing Body Radiation Dose at Ct: Feasibility Study Hara Et Al. Ct Iterative Reconstruction Technique Gastrointestinal Imaging Original Research , 2022 .

[36]  Huazhong Shu,et al.  Domain Progressive 3D Residual Convolution Network to Improve Low-Dose CT Imaging , 2019, IEEE Transactions on Medical Imaging.

[37]  Jin Liu,et al.  3D Feature Constrained Reconstruction for Low-Dose CT Imaging , 2018, IEEE Transactions on Circuits and Systems for Video Technology.