Review of the Self-Organizing Map (SOM) approach in water resources: Commentary

We provide some additional input and perspectives on Kalteh et al's review of the Self-Organizing Map (SOM) approach (Environ. Model. Softw. (2008), 23, 835-845). Map size selection is a key issue in SOM applications. Although there is no theoretical principle to determine the optimum map size, quantitative indicators such as quantization error, topographic error and eigenvalues have proven to be relevant tools to determine the optimal number of map units. Second, one of the most innovative applications of the SOM is the possibility of introducing a set of variables (e.g., biological) into a SOM previously trained with other variables (e.g. environmental). This can be achieved by calculating the mean value of each environmental variable in each output neuron of a SOM trained with biological variables, or by using a mask function to give a null weight to the biological variables, whereas environmental variables are given a weight of 1 so that the values for biological variables are visualized on a SOM previously trained with environmental variables only. We conclude that our different levels of expertise represent an opportunity for stimulating cross-fertilisation in the vast field of water research rather than simply yielding a collection of case studies to be re-examined.

[1]  Friedrich Recknagel,et al.  Ecological Informatics: Understanding Ecology by Biologically-Inspired Computation , 2003 .

[2]  S. Lek,et al.  Applications of artificial neural networks for patterning and predicting aquatic insect species richness in running waters , 2003 .

[3]  Young-Seuk Park,et al.  Patternizing communities by using an artificial neural network , 1996 .

[4]  FRANCISCO SÁNCHEZ-MARTOS,et al.  Assessment of Groundwater Quality by Means of Self-Organizing Maps: Application in a Semiarid Area , 2002, Environmental management.

[5]  R. Abrahart,et al.  Comparing neural network and autoregressive moving average techniques for the provision of continuous river flow forecasts in two contrasting catchments , 2000 .

[6]  R. Céréghino,et al.  Spatial patterns of macroinvertebrate functional feeding groups in streams in relation to physical variables and land-cover in Southwestern France , 2007, Landscape Ecology.

[7]  Young-Seuk Park,et al.  Use of unsupervised neural networks for ecoregional zoning of hydrosystems through diatom communities: case study of Adour-Garonne watershed (France) , 2004 .

[8]  Kuolin Hsu,et al.  Self‐organizing linear output map (SOLO): An artificial neural network suitable for hydrologic modeling and analysis , 2002 .

[9]  A. M. Kalteh,et al.  Review of the self-organizing map (SOM) approach in water resources: Analysis, modelling and application , 2008, Environ. Model. Softw..

[10]  Alexandra B. Ribeiro,et al.  Location model for CCA-treated wood waste remediation units using GIS and clustering methods , 2005, Environ. Model. Softw..

[11]  T. Kohonen Self-organized formation of topographically correct feature maps , 1982 .

[12]  Young-Seuk Park,et al.  Application of a self-organizing map to select representative species in multivariate analysis: A case study determining diatom distribution patterns across France , 2006, Ecol. Informatics.

[13]  R. Céréghino,et al.  Spatial analysis of stream invertebrates distribution in the Adour-Garonne drainage basin (France), using Kohonen self organizing maps , 2001 .

[14]  Young-Seuk Park,et al.  Community patterns of benthic macroinvertebrates collected on the national scale in Korea , 2007 .

[15]  Young-Seuk Park,et al.  Patterning long-term changes of fish community in large shallow Lake Peipsi , 2007 .

[16]  A. G. Frenich,et al.  Application of the Kohonen neural network in coastal water management: methodological development for the assessment and prediction of water quality. , 2001, Water research.

[17]  Teuvo Kohonen,et al.  Self-Organizing Maps , 2010 .

[18]  W. J. Walley,et al.  Self-Organising Maps for the Classification and Diagnosis of River Quality from Biological and Environmental Data , 1999, ISESS.

[19]  Teuvo Kohonen,et al.  Self-organized formation of topologically correct feature maps , 2004, Biological Cybernetics.

[20]  Gwo-Fong Lin,et al.  Identification of homogeneous regions for regional frequency analysis using the self-organizing map , 2006 .