MuSiC: Identifying mutational significance in cancer genomes
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Matthew B. Callaway | R. Wilson | E. Mardis | L. Ding | D. Koboldt | M. Wendl | D. Dooling | Qunyuan Zhang | C. Kandoth | M. Callaway | W. Schierding | N. Dees | Thomas B. Mooney | R. Wilson
[1] M. Kendall. Statistical Methods for Research Workers , 1937, Nature.
[2] C. Carter. Mendelian Inheritance in Man , 1967 .
[3] V. McKusick. Mendelian inheritance in man , 1971 .
[4] M. King,et al. Linkage of early-onset familial breast cancer to chromosome 17q21. , 1990, Science.
[5] Steven E. Bayer,et al. A strong candidate for the breast and ovarian cancer susceptibility gene BRCA1. , 1994, Science.
[6] V. McKusick. Mendelian Inheritance in Man: A Catalog of Human Genes and Genetic Disorders , 1997 .
[7] J. Naylor,et al. Mendelian inheritance in man: A catalog of human genes and genetic disorders , 1996 .
[8] Hiroyuki Ogata,et al. KEGG: Kyoto Encyclopedia of Genes and Genomes , 1999, Nucleic Acids Res..
[9] V. Rotter,et al. Oncogenic mutations of the p53 tumor suppressor: the demons of the guardian of the genome. , 2000, Cancer research.
[10] T. N. Bhat,et al. The Protein Data Bank , 2000, Nucleic Acids Res..
[11] Peer Bork,et al. SMART: a web-based tool for the study of genetically mobile domains , 2000, Nucleic Acids Res..
[12] M. Crompton. Mitochondrial intermembrane junctional complexes and their role in cell death , 2000, The Journal of physiology.
[13] M. King,et al. Breast and Ovarian Cancer Risks Due to Inherited Mutations in BRCA1 and BRCA2 , 2003, Science.
[14] Lincoln Stein,et al. Reactome: a knowledgebase of biological pathways , 2004, Nucleic Acids Res..
[15] J. Krischer,et al. BRCA1 and BRCA2 mutations account for a large proportion of ovarian carcinoma cases , 2005, Cancer.
[16] A. Lash,et al. Frequent Mutation of the PIK3CA Gene in Ovarian and Breast Cancers , 2005, Clinical Cancer Research.
[17] Yan Zhang,et al. CanPredict: a computational tool for predicting cancer-associated missense mutations , 2007, Nucleic Acids Res..
[18] G. Parmigiani,et al. A multidimensional analysis of genes mutated in breast and colorectal cancers. , 2007, Genome research.
[19] Guy Cavet,et al. Comment on "The Consensus Coding Sequences of Human Breast and Colorectal Cancers" , 2007, Science.
[20] Mansoor Abdul,et al. Ryanodine Receptor Expression Correlates with Tumor Grade in Breast Cancer , 2008, Pathology & Oncology Research.
[21] E. Birney,et al. Pfam: the protein families database , 2013, Nucleic Acids Res..
[22] B. Benayoun,et al. The mutations and potential targets of the forkhead transcription factor FOXL2 , 2008, Molecular and Cellular Endocrinology.
[23] S A Forbes,et al. The Catalogue of Somatic Mutations in Cancer (COSMIC) , 2008, Current protocols in human genetics.
[24] Brian H. Dunford-Shore,et al. Somatic mutations affect key pathways in lung adenocarcinoma , 2008, Nature.
[25] Pooja Mittal,et al. A novel signaling pathway impact analysis , 2009, Bioinform..
[26] Cyrus Chothia,et al. SUPERFAMILY—sophisticated comparative genomics, data mining, visualization and phylogeny , 2008, Nucleic Acids Res..
[27] Gonçalo R. Abecasis,et al. The Sequence Alignment/Map format and SAMtools , 2009, Bioinform..
[28] S. Henikoff,et al. Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm , 2009, Nature Protocols.
[29] P. Bork,et al. A method and server for predicting damaging missense mutations , 2010, Nature Methods.
[30] Amos Bairoch,et al. PROSITE, a protein domain database for functional characterization and annotation , 2009, Nucleic Acids Res..
[31] David Haussler,et al. Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM , 2010, Bioinform..
[32] H. Hakonarson,et al. ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data , 2010, Nucleic acids research.
[33] Carlos Caldas,et al. Driver mutations in TP53 are ubiquitous in high grade serous carcinoma of the ovary , 2010, The Journal of pathology.
[34] Zhiwei Wang,et al. Forkhead box M1 transcription factor: a novel target for cancer therapy. , 2010, Cancer treatment reviews.
[35] R. Hruban,et al. Prioritization of driver mutations in pancreatic cancer using cancer-specific high-throughput annotation of somatic mutations (CHASM) , 2010, Cancer biology & therapy.
[36] L. Holm,et al. The Pfam protein families database , 2005, Nucleic Acids Res..
[37] C. Sander,et al. Predicting the functional impact of protein mutations: application to cancer genomics , 2011, Nucleic acids research.
[38] Benjamin J. Raphael,et al. Integrated Genomic Analyses of Ovarian Carcinoma , 2011, Nature.
[39] Ling Lin,et al. PathScan: a tool for discerning mutational significance in groups of putative cancer genes , 2011, Bioinform..
[40] Elaine R. Mardis,et al. A decade’s perspective on DNA sequencing technology , 2011, Nature.