MicroRNA transcriptome analysis for elucidating the immune mechanism of the redclaw crayfish Cherax quadricarinatus under Decapod iridescent virus 1 infection.

[1]  Yongyi Jia,et al.  Changes in the gene expression and gut microbiome to the infection of decapod iridescent virus 1 in Cherax quadricarinatus. , 2022, Fish & shellfish immunology.

[2]  Limei Xu,et al.  Proteomic analysis of the Decapod iridescent virus 1. , 2022, Virus research.

[3]  Chunpeng Fu,et al.  MicroRNA transcriptome analysis of oriental river prawn Macrobrachium nipponense in responding to starvation stress. , 2021, Comparative biochemistry and physiology. Part D, Genomics & proteomics.

[4]  Ningning Yang,et al.  Effects of miR-218-1-3p and miR-149 on proliferation and apoptosis of non-small cell lung cancer cells. , 2020, Oncology letters.

[5]  Mei Liu,et al.  Identification and Profiling of MicroRNAs During Embryogenesis in the Red Claw Crayfish Cherax quadricarinatus , 2020, Frontiers in Physiology.

[6]  Fei Zhu,et al.  Differential expression of microRNAs in mud crab Scylla paramamosain in response to white spot syndrome virus (WSSV) infection. , 2020, Fish & shellfish immunology.

[7]  Anping Li,et al.  The role of cancer-derived microRNAs in cancer immune escape , 2020, Journal of Hematology & Oncology.

[8]  Xiaomei Wang,et al.  MiR-125b Suppression Inhibits Apoptosis and Negatively Regulates Sema4D in Avian Leukosis Virus-Transformed Cells , 2019, Viruses.

[9]  Jie Huang,et al.  Description of a Natural Infection with Decapod Iridescent Virus 1 in Farmed Giant Freshwater Prawn, Macrobrachium rosenbergii , 2019, Viruses.

[10]  S. Panyim,et al.  Identification and expression of white spot syndrome virus-encoded microRNAs in infected Penaeus monodon , 2019, Aquaculture.

[11]  G. Meister,et al.  Regulation of microRNA biogenesis and its crosstalk with other cellular pathways , 2018, Nature Reviews Molecular Cell Biology.

[12]  Z. Qin,et al.  Transcriptome analysis of Pacific white shrimp (Litopenaeus vannamei) challenged by Vibrio parahaemolyticus reveals unique immune‐related genes , 2018, Fish & shellfish immunology.

[13]  Z. Du,et al.  Identification and characterization of lymph organ microRNAs in red swamp crayfish, Procambarus clarkii infected with white spot syndrome virus. , 2017, Fish & shellfish immunology.

[14]  Xupeng Li,et al.  The identification of microRNAs involved in the response of Chinese shrimp Fenneropenaeus chinensis to white spot syndrome virus infection , 2017, Fish & shellfish immunology.

[15]  Zhi Wang,et al.  MicroRNA-100 is involved in shrimp immune response to white spot syndrome virus (WSSV) and Vibrio alginolyticus infection , 2017, Scientific Reports.

[16]  C. Zeng,et al.  Cannibalism of Decapod Crustaceans and Implications for Their Aquaculture: A Review of its Prevalence, Influencing Factors, and Mitigating Methods , 2017 .

[17]  Chuang Meng,et al.  Characterization of microRNAs by deep sequencing in red claw crayfish Cherax quadricarinatus haematopoietic tissue cells after white spot syndrome virus infection. , 2016, Fish & shellfish immunology.

[18]  Jianguo He,et al.  Transcriptome analysis of the unfolded protein response in hemocytes of Litopenaeus vannamei. , 2016, Fish & shellfish immunology.

[19]  P. Anastácio,et al.  The red swamp crayfish Procambarus clarkii in Europe: Impacts on aquatic ecosystems and human well-being , 2016 .

[20]  Zhi Wang,et al.  Differential expression of microRNAs in shrimp Marsupenaeus japonicus in response to Vibrio alginolyticus infection. , 2016, Developmental and comparative immunology.

[21]  Timothy W. Flegel,et al.  Review of current disease threats for cultivated penaeid shrimp in Asia , 2016 .

[22]  Y. Zhang,et al.  High-throughput sequencing and degradome analysis reveal neutral evolution of Cercis gigantea microRNAs and their targets , 2015, Planta.

[23]  Ana Kozomara,et al.  miRBase: annotating high confidence microRNAs using deep sequencing data , 2013, Nucleic Acids Res..

[24]  C. Staedel,et al.  MicroRNAs and bacterial infection , 2013, Cellular microbiology.

[25]  Frank Stahl,et al.  Transcriptome analysis using next-generation sequencing. , 2013, Current opinion in biotechnology.

[26]  C. Webster,et al.  A Review of the Culture and Diseases of Redclaw Crayfish Cherax quadricarinatus (Von Martens 1868) , 2013 .

[27]  J. Olden,et al.  Crayfish occupancy and abundance in lakes of the Pacific Northwest, USA , 2012, Freshwater Science.

[28]  Sebastian D. Mackowiak,et al.  miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades , 2011, Nucleic acids research.

[29]  Davis J. McCarthy,et al.  edgeR: a Bioconductor package for differential expression analysis of digital gene expression data , 2009, Bioinform..

[30]  S. Akira,et al.  Pathogen Recognition and Innate Immunity , 2006, Cell.

[31]  Adam M. Gustafson,et al.  microRNA-Directed Phasing during Trans-Acting siRNA Biogenesis in Plants , 2005, Cell.

[32]  Lin He,et al.  MicroRNAs: small RNAs with a big role in gene regulation , 2004, Nature Reviews Genetics.

[33]  V. Kim,et al.  The nuclear RNase III Drosha initiates microRNA processing , 2003, Nature.

[34]  Wang Xiao-fei.  Effects of Starvation Time on Utilization of Energy Materials and Energy Budget of Macrobrachium nipponense , 2010 .

[35]  Claude-Alain H. Roten,et al.  Fast and accurate short read alignment with Burrows–Wheeler transform , 2009, Bioinform..