A sequentially Markov conditional sampling distribution for structured populations with migration and recombination.
暂无分享,去创建一个
[1] R. Griffiths,et al. An ancestral recombination graph , 1997 .
[2] H. Herbots. The Structured Coalescent. , 1997 .
[3] B. Charlesworth. Measures of divergence between populations and the effect of forces that reduce variability. , 1998, Molecular biology and evolution.
[4] J. Hein,et al. Recombination as a point process along sequences. , 1999, Theoretical population biology.
[5] P. Donnelly,et al. Inference in molecular population genetics , 2000 .
[6] P. Donnelly,et al. Estimating recombination rates from population genetic data. , 2001, Genetics.
[7] M. Stephens,et al. Modelling Linkage Disequilibrium , And Identifying Recombination Hotspots Using SNP Data , 2003 .
[8] M. Stephens,et al. Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data. , 2003, Genetics.
[9] M. De Iorio,et al. Importance sampling on coalescent histories. I , 2004, Advances in Applied Probability.
[10] M. De Iorio,et al. Importance sampling on coalescent histories. II: Subdivided population models , 2004, Advances in Applied Probability.
[11] Eric Moulines,et al. Inference in hidden Markov models , 2010, Springer series in statistics.
[12] M. Stephens,et al. Accounting for Decay of Linkage Disequilibrium in Haplotype Inference and Missing-data Imputation , 2022 .
[13] G. McVean,et al. Approximating the coalescent with recombination , 2005, Philosophical Transactions of the Royal Society B: Biological Sciences.
[14] Paul Marjoram,et al. Fast "coalescent" simulation , 2006, BMC Genetics.
[15] P. Donnelly,et al. A new multipoint method for genome-wide association studies by imputation of genotypes , 2007, Nature Genetics.
[16] G. McVean,et al. Estimating Meiotic Gene Conversion Rates From Population Genetic Data , 2007, Genetics.
[17] Daniel Falush,et al. Inferring Human Colonization History Using a Copying Model , 2008, PLoS genetics.
[18] Yun S. Song,et al. Importance sampling and the two-locus model with subdivided population structure , 2008, Advances in Applied Probability.
[19] C. Fefferman,et al. Can one learn history from the allelic spectrum? , 2008, Theoretical population biology.
[20] P. Donnelly,et al. A Flexible and Accurate Genotype Imputation Method for the Next Generation of Genome-Wide Association Studies , 2009, PLoS genetics.
[21] G. Coop,et al. An approximate likelihood for genetic data under a model with recombination and population splitting. , 2009, Theoretical population biology.
[22] Yun S. Song,et al. Joint estimation of gene conversion rates and mean conversion tract lengths from population SNP data , 2009, Bioinform..
[23] D. Reich,et al. Sensitive Detection of Chromosomal Segments of Distinct Ancestry in Admixed Populations , 2009, PLoS genetics.
[24] Ryan D. Hernandez,et al. Inferring the Joint Demographic History of Multiple Populations from Multidimensional SNP Frequency Data , 2009, PLoS genetics.
[25] G. Abecasis,et al. MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes , 2010, Genetic epidemiology.
[26] Joshua S. Paul,et al. A Principled Approach to Deriving Approximate Conditional Sampling Distributions in Population Genetics Models with Recombination , 2010, Genetics.
[27] J. Hey,et al. Estimating Divergence Parameters With Small Samples From a Large Number of Loci , 2010, Genetics.
[28] Joshua S. Paul,et al. An Accurate Sequentially Markov Conditional Sampling Distribution for the Coalescent With Recombination , 2011, Genetics.
[29] A. Hobolth,et al. Estimating Divergence Time and Ancestral Effective Population Size of Bornean and Sumatran Orangutan Subspecies Using a Coalescent Hidden Markov Model , 2011, PLoS genetics.
[30] R. Durbin,et al. Inference of human population history from individual whole-genome sequences. , 2011, Nature.
[31] Ingo Ruczinski,et al. Recombination rates in admixed individuals identified by ancestry-based inference , 2011, Nature Genetics.
[32] Gabor T. Marth,et al. Demographic history and rare allele sharing among human populations , 2011, Proceedings of the National Academy of Sciences.
[33] D. Falush,et al. Inference of Population Structure using Dense Haplotype Data , 2012, PLoS genetics.
[34] Yun S. Song,et al. Blockwise HMM computation for large-scale population genomic inference , 2012, Bioinform..